RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 PLCH2O75038 1416 aa16.55■□□□□ 0.24
VWA3A-201ENST00000299840 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
VWA3A-201ENST00000299840 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
VWA3A-201ENST00000299840 EHBP1L1Q8N3D4 1523 aa16.54■□□□□ 0.24
VWA3A-201ENST00000299840 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
VWA3A-201ENST00000299840 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
VWA3A-201ENST00000299840 PREX2Q70Z35 1606 aa16.52■□□□□ 0.23
VWA3A-201ENST00000299840 FANCAO15360 1455 aa16.51■□□□□ 0.23
VWA3A-201ENST00000299840 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
VWA3A-201ENST00000299840 AKNAQ7Z591 1439 aa16.49■□□□□ 0.23
VWA3A-201ENST00000299840 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
VWA3A-201ENST00000299840 RICTORQ6R327 1708 aa16.47■□□□□ 0.23
VWA3A-201ENST00000299840 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
VWA3A-201ENST00000299840 EFCAB2Q5VUJ9 269 aa16.46■□□□□ 0.23
VWA3A-201ENST00000299840 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.22
VWA3A-201ENST00000299840 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
VWA3A-201ENST00000299840 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
VWA3A-201ENST00000299840 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
VWA3A-201ENST00000299840 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
VWA3A-201ENST00000299840 DENND4BO75064 1496 aaPredicted RBP16.43■□□□□ 0.22
VWA3A-201ENST00000299840 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
VWA3A-201ENST00000299840 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
VWA3A-201ENST00000299840 NCOA2Q15596 1464 aa16.4■□□□□ 0.22
VWA3A-201ENST00000299840 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
VWA3A-201ENST00000299840 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
VWA3A-201ENST00000299840 ABCC1P33527 1531 aa16.39■□□□□ 0.21
VWA3A-201ENST00000299840 SAMD9LQ8IVG5 1584 aa16.38■□□□□ 0.21
VWA3A-201ENST00000299840 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
VWA3A-201ENST00000299840 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
VWA3A-201ENST00000299840 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
VWA3A-201ENST00000299840 MAGI2Q86UL8 1455 aa16.36■□□□□ 0.21
VWA3A-201ENST00000299840 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
VWA3A-201ENST00000299840 KDM5CP41229 1560 aa16.35■□□□□ 0.21
VWA3A-201ENST00000299840 KIAA1107Q9UPP5 1409 aa16.35■□□□□ 0.21
VWA3A-201ENST00000299840 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
VWA3A-201ENST00000299840 ZNF518AQ6AHZ1 1483 aa16.34■□□□□ 0.21
VWA3A-201ENST00000299840 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
VWA3A-201ENST00000299840 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
VWA3A-201ENST00000299840 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
VWA3A-201ENST00000299840 ZFYVE16Q7Z3T8 1539 aa16.3■□□□□ 0.2
VWA3A-201ENST00000299840 SYCP2Q9BX26 1530 aa16.3■□□□□ 0.2
VWA3A-201ENST00000299840 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
VWA3A-201ENST00000299840 HECW2Q9P2P5 1572 aa16.29■□□□□ 0.2
VWA3A-201ENST00000299840 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
VWA3A-201ENST00000299840 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
VWA3A-201ENST00000299840 MYOM3Q5VTT5 1437 aa16.28■□□□□ 0.2
VWA3A-201ENST00000299840 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
VWA3A-201ENST00000299840 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
VWA3A-201ENST00000299840 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
VWA3A-201ENST00000299840 MBD5Q9P267 1494 aa16.26■□□□□ 0.19
VWA3A-201ENST00000299840 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
VWA3A-201ENST00000299840 ANP32EQ9BTT0 268 aa16.25■□□□□ 0.19
VWA3A-201ENST00000299840 ARHGEF5Q12774 1597 aa16.25■□□□□ 0.19
VWA3A-201ENST00000299840 YEATS2Q9ULM3 1422 aa16.25■□□□□ 0.19
VWA3A-201ENST00000299840 REREQ9P2R6 1566 aa16.24■□□□□ 0.19
VWA3A-201ENST00000299840 ZNF644Q9H582 1327 aaPredicted RBP16.24■□□□□ 0.19
VWA3A-201ENST00000299840 ATP10AO60312 1499 aa16.24■□□□□ 0.19
VWA3A-201ENST00000299840 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
VWA3A-201ENST00000299840 INO80Q9ULG1 1556 aaPredicted RBP16.23■□□□□ 0.19
VWA3A-201ENST00000299840 DIP2CQ9Y2E4 1556 aa16.23■□□□□ 0.19
VWA3A-201ENST00000299840 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
VWA3A-201ENST00000299840 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
VWA3A-201ENST00000299840 SIGLEC1Q9BZZ2 1709 aa16.21■□□□□ 0.19
VWA3A-201ENST00000299840 GTF3C3Q9Y5Q9 886 aa16.21■□□□□ 0.19
VWA3A-201ENST00000299840 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
VWA3A-201ENST00000299840 C9orf84Q5VXU9 1444 aa16.21■□□□□ 0.18
VWA3A-201ENST00000299840 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.18
VWA3A-201ENST00000299840 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
VWA3A-201ENST00000299840 TCOF1Q13428 1488 aaKnown RBP16.2■□□□□ 0.18
VWA3A-201ENST00000299840 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
VWA3A-201ENST00000299840 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
VWA3A-201ENST00000299840 ADAMTSL3P82987 1691 aa16.19■□□□□ 0.18
VWA3A-201ENST00000299840 KDM4FA0A1W2PPD8 638 aa16.19■□□□□ 0.18
VWA3A-201ENST00000299840 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
VWA3A-201ENST00000299840 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
VWA3A-201ENST00000299840 MAST1Q9Y2H9 1570 aa16.18■□□□□ 0.18
VWA3A-201ENST00000299840 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
VWA3A-201ENST00000299840 AGLP35573 1532 aa16.17■□□□□ 0.18
VWA3A-201ENST00000299840 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
VWA3A-201ENST00000299840 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
VWA3A-201ENST00000299840 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
VWA3A-201ENST00000299840 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
VWA3A-201ENST00000299840 NEUROD1Q13562 356 aa16.12■□□□□ 0.17
VWA3A-201ENST00000299840 SHANK2Q9UPX8 1470 aa16.11■□□□□ 0.17
VWA3A-201ENST00000299840 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
VWA3A-201ENST00000299840 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
VWA3A-201ENST00000299840 A2MP01023 1474 aa16.1■□□□□ 0.17
VWA3A-201ENST00000299840 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
VWA3A-201ENST00000299840 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
VWA3A-201ENST00000299840 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
VWA3A-201ENST00000299840 ABCC5O15440 1437 aa16.09■□□□□ 0.17
VWA3A-201ENST00000299840 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
VWA3A-201ENST00000299840 DAPK1P53355 1430 aa16.08■□□□□ 0.16
VWA3A-201ENST00000299840 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
VWA3A-201ENST00000299840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
VWA3A-201ENST00000299840 DHX29Q7Z478 1369 aaKnown RBP16.06■□□□□ 0.16
VWA3A-201ENST00000299840 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
VWA3A-201ENST00000299840 AEBP2Q6ZN18 517 aaPredicted RBP16.06■□□□□ 0.16
VWA3A-201ENST00000299840 UBE2Q2Q8WVN8 375 aa16.05■□□□□ 0.16
VWA3A-201ENST00000299840 EIF2AK4Q9P2K8 1649 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms