RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 PTPRMP28827 1452 aa28.27■■■□□ 2.12
TFF3-201ENST00000291525 SCAPERQ9BY12 1400 aa28.27■■■□□ 2.12
TFF3-201ENST00000291525 EFCAB2Q5VUJ9 269 aa28.27■■■□□ 2.12
TFF3-201ENST00000291525 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
TFF3-201ENST00000291525 POGZQ7Z3K3 1410 aa28.26■■■□□ 2.12
TFF3-201ENST00000291525 CASKIN1Q8WXD9 1431 aa28.26■■■□□ 2.12
TFF3-201ENST00000291525 MADDQ8WXG6 1647 aa28.25■■■□□ 2.11
TFF3-201ENST00000291525 ARHGAP5Q13017 1502 aa28.22■■■□□ 2.11
TFF3-201ENST00000291525 FYCO1Q9BQS8 1478 aa28.2■■■□□ 2.1
TFF3-201ENST00000291525 YEATS2Q9ULM3 1422 aa28.19■■■□□ 2.1
TFF3-201ENST00000291525 RIMS1Q86UR5 1692 aaKnown RBP28.16■■■□□ 2.1
TFF3-201ENST00000291525 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
TFF3-201ENST00000291525 CDC42BPBQ9Y5S2 1711 aa28.12■■■□□ 2.09
TFF3-201ENST00000291525 PREX2Q70Z35 1606 aa28.12■■■□□ 2.09
TFF3-201ENST00000291525 ATP10AO60312 1499 aa28.11■■■□□ 2.09
TFF3-201ENST00000291525 C9orf84Q5VXU9 1444 aa28.1■■■□□ 2.09
TFF3-201ENST00000291525 SIGLEC1Q9BZZ2 1709 aa28.09■■■□□ 2.09
TFF3-201ENST00000291525 KDM5CP41229 1560 aa28.09■■■□□ 2.09
TFF3-201ENST00000291525 FER1L4A9Z1Z3 1794 aa28.06■■■□□ 2.08
TFF3-201ENST00000291525 MYT1LQ9UL68 1186 aa28.03■■■□□ 2.08
TFF3-201ENST00000291525 CDC42BPAQ5VT25 1732 aa28.03■■■□□ 2.08
TFF3-201ENST00000291525 ABCC1P33527 1531 aa28.02■■■□□ 2.08
TFF3-201ENST00000291525 MLECQ14165 292 aa28.02■■■□□ 2.08
TFF3-201ENST00000291525 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
TFF3-201ENST00000291525 ITSN2Q9NZM3 1697 aa28■■■□□ 2.07
TFF3-201ENST00000291525 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
TFF3-201ENST00000291525 LMTK3Q96Q04 1460 aa27.97■■■□□ 2.07
TFF3-201ENST00000291525 MLH3Q9UHC1 1453 aa27.97■■■□□ 2.07
TFF3-201ENST00000291525 REREQ9P2R6 1566 aa27.96■■■□□ 2.07
TFF3-201ENST00000291525 DIP2CQ9Y2E4 1556 aa27.96■■■□□ 2.07
TFF3-201ENST00000291525 ILDR1Q86SU0 546 aaPredicted RBP27.95■■■□□ 2.06
TFF3-201ENST00000291525 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
TFF3-201ENST00000291525 ABCA6Q8N139 1617 aa27.93■■■□□ 2.06
TFF3-201ENST00000291525 TRAPPC8Q9Y2L5 1435 aa27.92■■■□□ 2.06
TFF3-201ENST00000291525 MTUS2Q5JR59 1369 aa27.9■■■□□ 2.06
TFF3-201ENST00000291525 GPATCH8Q9UKJ3 1502 aaKnown RBP27.89■■■□□ 2.06
TFF3-201ENST00000291525 CEP162Q5TB80 1403 aa27.88■■■□□ 2.05
TFF3-201ENST00000291525 SAMD9LQ8IVG5 1584 aa27.88■■■□□ 2.05
TFF3-201ENST00000291525 ZNF777Q9ULD5 760 aaPredicted RBP27.87■■■□□ 2.05
TFF3-201ENST00000291525 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
TFF3-201ENST00000291525 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
TFF3-201ENST00000291525 PLEKHH2Q8IVE3 1493 aa27.85■■■□□ 2.05
TFF3-201ENST00000291525 AGLP35573 1532 aa27.85■■■□□ 2.05
TFF3-201ENST00000291525 SYCP2Q9BX26 1530 aa27.85■■■□□ 2.05
TFF3-201ENST00000291525 EHBP1L1Q8N3D4 1523 aa27.83■■■□□ 2.05
TFF3-201ENST00000291525 CFDP1Q9UEE9 299 aaPredicted RBP27.82■■■□□ 2.04
TFF3-201ENST00000291525 PREX1Q8TCU6 1659 aa27.81■■■□□ 2.04
TFF3-201ENST00000291525 KIAA1107Q9UPP5 1409 aa27.8■■■□□ 2.04
TFF3-201ENST00000291525 ESF1Q9H501 851 aaKnown RBP27.79■■■□□ 2.04
TFF3-201ENST00000291525 SPAG9O60271 1321 aaKnown RBP27.78■■■□□ 2.04
TFF3-201ENST00000291525 HSPA2P54652 639 aa27.77■■■□□ 2.04
TFF3-201ENST00000291525 TIAM1Q13009 1591 aa27.75■■■□□ 2.03
TFF3-201ENST00000291525 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
TFF3-201ENST00000291525 SETD1BQ9UPS6 1966 aaKnown RBP27.74■■■□□ 2.03
TFF3-201ENST00000291525 ATP7AQ04656 1500 aa27.73■■■□□ 2.03
TFF3-201ENST00000291525 CEBPAP49715 358 aaPredicted RBP27.73■■■□□ 2.03
TFF3-201ENST00000291525 CNTLNQ9NXG0 1405 aa27.72■■■□□ 2.03
TFF3-201ENST00000291525 INO80Q9ULG1 1556 aaPredicted RBP27.71■■■□□ 2.03
TFF3-201ENST00000291525 C3P01024 1663 aa27.71■■■□□ 2.03
TFF3-201ENST00000291525 UHRF1BP1Q6BDS2 1440 aa27.7■■■□□ 2.03
TFF3-201ENST00000291525 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
TFF3-201ENST00000291525 FBXO41Q8TF61 875 aa27.66■■■□□ 2.02
TFF3-201ENST00000291525 MROH2AA6NES4 1674 aa27.64■■■□□ 2.02
TFF3-201ENST00000291525 A2MP01023 1474 aa27.64■■■□□ 2.01
TFF3-201ENST00000291525 ADGBQ8N7X0 1667 aa27.63■■■□□ 2.01
TFF3-201ENST00000291525 PLXNC1O60486 1568 aa27.63■■■□□ 2.01
TFF3-201ENST00000291525 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
TFF3-201ENST00000291525 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
TFF3-201ENST00000291525 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
TFF3-201ENST00000291525 MBD5Q9P267 1494 aa27.58■■■□□ 2.01
TFF3-201ENST00000291525 RTEL1-TNFRSF6BF6WH68 1400 aa27.57■■■□□ 2
TFF3-201ENST00000291525 DMRT2Q9Y5R5 561 aa27.56■■■□□ 2
TFF3-201ENST00000291525 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
TFF3-201ENST00000291525 NPATQ14207 1427 aa27.54■■■□□ 2
TFF3-201ENST00000291525 CLTCQ00610 1675 aaKnown RBP27.53■■■□□ 2
TFF3-201ENST00000291525 CAMSAP2Q08AD1 1489 aa27.53■■■□□ 2
TFF3-201ENST00000291525 CCDC141Q6ZP82 1450 aa27.53■■■□□ 2
TFF3-201ENST00000291525 STRCQ7RTU9 1775 aa27.53■■■□□ 2
TFF3-201ENST00000291525 RSPH4AQ5TD94 716 aa27.52■■■□□ 2
TFF3-201ENST00000291525 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
TFF3-201ENST00000291525 PPP6R1Q9UPN7 881 aa27.5■■□□□ 1.99
TFF3-201ENST00000291525 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
TFF3-201ENST00000291525 GGT6Q6P531 493 aa27.49■■□□□ 1.99
TFF3-201ENST00000291525 MAP3K1Q13233 1512 aa27.47■■□□□ 1.99
TFF3-201ENST00000291525 ARHGEF5Q12774 1597 aa27.46■■□□□ 1.99
TFF3-201ENST00000291525 DHX29Q7Z478 1369 aaKnown RBP27.46■■□□□ 1.99
TFF3-201ENST00000291525 CERKQ8TCT0 537 aa27.44■■□□□ 1.98
TFF3-201ENST00000291525 PTPRTO14522 1441 aa27.42■■□□□ 1.98
TFF3-201ENST00000291525 TSPY4P0CV99 314 aa27.4■■□□□ 1.98
TFF3-201ENST00000291525 TSPY10P0CW01 314 aa27.4■■□□□ 1.98
TFF3-201ENST00000291525 MYO3AQ8NEV4 1616 aa27.39■■□□□ 1.98
TFF3-201ENST00000291525 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
TFF3-201ENST00000291525 NCOA1Q15788 1441 aa27.39■■□□□ 1.97
TFF3-201ENST00000291525 ZNF142P52746 1687 aaPredicted RBP27.39■■□□□ 1.97
TFF3-201ENST00000291525 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
TFF3-201ENST00000291525 CAMSAP1Q5T5Y3 1602 aa27.37■■□□□ 1.97
TFF3-201ENST00000291525 KIF3BO15066 747 aa27.36■■□□□ 1.97
TFF3-201ENST00000291525 MIA2Q96PC5 1412 aa27.33■■□□□ 1.97
TFF3-201ENST00000291525 KDM5DQ9BY66 1539 aa27.33■■□□□ 1.97
TFF3-201ENST00000291525 CEP170BQ9Y4F5 1589 aaPredicted RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms