RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 ADGRL1O94910 1474 aa35.86■■■■□ 3.33
GFRA4-201ENST00000290417 EHBP1L1Q8N3D4 1523 aa35.85■■■■□ 3.33
GFRA4-201ENST00000290417 RICTORQ6R327 1708 aa35.85■■■■□ 3.33
GFRA4-201ENST00000290417 TIAM1Q13009 1591 aa35.84■■■■□ 3.33
GFRA4-201ENST00000290417 SCAPERQ9BY12 1400 aa35.8■■■■□ 3.32
GFRA4-201ENST00000290417 GPATCH8Q9UKJ3 1502 aaKnown RBP35.74■■■■□ 3.31
GFRA4-201ENST00000290417 CCNB3Q8WWL7 1395 aa35.73■■■■□ 3.31
GFRA4-201ENST00000290417 POGZQ7Z3K3 1410 aa35.72■■■■□ 3.31
GFRA4-201ENST00000290417 SUPT6HQ7KZ85 1726 aaKnown RBP35.71■■■■□ 3.31
GFRA4-201ENST00000290417 MAP3K1Q13233 1512 aa35.69■■■■□ 3.3
GFRA4-201ENST00000290417 ZMYM4Q5VZL5 1548 aa35.69■■■■□ 3.3
GFRA4-201ENST00000290417 AEBP2Q6ZN18 517 aaPredicted RBP35.67■■■■□ 3.3
GFRA4-201ENST00000290417 LRRC9Q6ZRR7 1453 aa35.67■■■■□ 3.3
GFRA4-201ENST00000290417 ABCC1P33527 1531 aa35.66■■■■□ 3.3
GFRA4-201ENST00000290417 ZNF777Q9ULD5 760 aaPredicted RBP35.66■■■■□ 3.3
GFRA4-201ENST00000290417 ITSN2Q9NZM3 1697 aa35.65■■■■□ 3.3
GFRA4-201ENST00000290417 KDM4FA0A1W2PPD8 638 aa35.64■■■■□ 3.3
GFRA4-201ENST00000290417 CFDP1Q9UEE9 299 aaPredicted RBP35.64■■■■□ 3.3
GFRA4-201ENST00000290417 NCOA2Q15596 1464 aa35.63■■■■□ 3.29
GFRA4-201ENST00000290417 ARHGEF40Q8TER5 1519 aa35.63■■■■□ 3.29
GFRA4-201ENST00000290417 SAMD9LQ8IVG5 1584 aa35.63■■■■□ 3.29
GFRA4-201ENST00000290417 ZNF518AQ6AHZ1 1483 aa35.62■■■■□ 3.29
GFRA4-201ENST00000290417 APLP2Q06481 763 aa35.61■■■■□ 3.29
GFRA4-201ENST00000290417 ZFYVE16Q7Z3T8 1539 aa35.6■■■■□ 3.29
GFRA4-201ENST00000290417 ARHGEF12Q9NZN5 1544 aa35.6■■■■□ 3.29
GFRA4-201ENST00000290417 KANK4Q5T7N3 995 aaPredicted RBP35.59■■■■□ 3.29
GFRA4-201ENST00000290417 AFAP1Q8N556 730 aa35.59■■■■□ 3.29
GFRA4-201ENST00000290417 MAGI2Q86UL8 1455 aa35.58■■■■□ 3.29
GFRA4-201ENST00000290417 YEATS2Q9ULM3 1422 aa35.57■■■■□ 3.28
GFRA4-201ENST00000290417 KDM5CP41229 1560 aa35.56■■■■□ 3.28
GFRA4-201ENST00000290417 TRAPPC8Q9Y2L5 1435 aa35.54■■■■□ 3.28
GFRA4-201ENST00000290417 SYCP2Q9BX26 1530 aa35.53■■■■□ 3.28
GFRA4-201ENST00000290417 PLEKHH2Q8IVE3 1493 aa35.5■■■■□ 3.27
GFRA4-201ENST00000290417 HECW2Q9P2P5 1572 aa35.5■■■■□ 3.27
GFRA4-201ENST00000290417 MYT1LQ9UL68 1186 aa35.49■■■■□ 3.27
GFRA4-201ENST00000290417 HNRNPMP52272 730 aaKnown RBP eCLIP35.49■■■■□ 3.27
GFRA4-201ENST00000290417 ARID4BQ4LE39 1312 aaPredicted RBP35.47■■■■□ 3.27
GFRA4-201ENST00000290417 KIAA1107Q9UPP5 1409 aa35.46■■■■□ 3.27
GFRA4-201ENST00000290417 ZNF644Q9H582 1327 aaPredicted RBP35.45■■■■□ 3.27
GFRA4-201ENST00000290417 MLH3Q9UHC1 1453 aa35.42■■■■□ 3.26
GFRA4-201ENST00000290417 ATP10AO60312 1499 aa35.41■■■■□ 3.26
GFRA4-201ENST00000290417 SIGLEC1Q9BZZ2 1709 aa35.41■■■■□ 3.26
GFRA4-201ENST00000290417 BCORL1Q5H9F3 1711 aa35.39■■■■□ 3.26
GFRA4-201ENST00000290417 KIDINS220Q9ULH0 1771 aa35.38■■■■□ 3.25
GFRA4-201ENST00000290417 C9orf84Q5VXU9 1444 aa35.38■■■■□ 3.25
GFRA4-201ENST00000290417 DIP2CQ9Y2E4 1556 aa35.38■■■■□ 3.25
GFRA4-201ENST00000290417 ABCA6Q8N139 1617 aa35.38■■■■□ 3.25
GFRA4-201ENST00000290417 CAMSAP2Q08AD1 1489 aa35.36■■■■□ 3.25
GFRA4-201ENST00000290417 ADAMTSL3P82987 1691 aa35.34■■■■□ 3.25
GFRA4-201ENST00000290417 SPAG9O60271 1321 aaKnown RBP35.33■■■■□ 3.25
GFRA4-201ENST00000290417 MYOM3Q5VTT5 1437 aa35.33■■■■□ 3.25
GFRA4-201ENST00000290417 MBD5Q9P267 1494 aa35.32■■■■□ 3.24
GFRA4-201ENST00000290417 ATP7AQ04656 1500 aa35.28■■■■□ 3.24
GFRA4-201ENST00000290417 INO80Q9ULG1 1556 aaPredicted RBP35.27■■■■□ 3.24
GFRA4-201ENST00000290417 MIA2Q96PC5 1412 aa35.26■■■■□ 3.23
GFRA4-201ENST00000290417 MADDQ8WXG6 1647 aa35.26■■■■□ 3.23
GFRA4-201ENST00000290417 REREQ9P2R6 1566 aa35.25■■■■□ 3.23
GFRA4-201ENST00000290417 MLECQ14165 292 aa35.24■■■■□ 3.23
GFRA4-201ENST00000290417 CCDC141Q6ZP82 1450 aa35.22■■■■□ 3.23
GFRA4-201ENST00000290417 ARHGEF5Q12774 1597 aa35.2■■■■□ 3.23
GFRA4-201ENST00000290417 RSPH4AQ5TD94 716 aa35.18■■■■□ 3.22
GFRA4-201ENST00000290417 RIMS1Q86UR5 1692 aaKnown RBP35.17■■■■□ 3.22
GFRA4-201ENST00000290417 PTPN23Q9H3S7 1636 aa35.15■■■■□ 3.22
GFRA4-201ENST00000290417 FER1L4A9Z1Z3 1794 aa35.15■■■■□ 3.22
GFRA4-201ENST00000290417 PTPRMP28827 1452 aa35.14■■■■□ 3.22
GFRA4-201ENST00000290417 AGLP35573 1532 aa35.13■■■■□ 3.21
GFRA4-201ENST00000290417 RTEL1-TNFRSF6BF6WH68 1400 aa35.13■■■■□ 3.21
GFRA4-201ENST00000290417 ADGBQ8N7X0 1667 aa35.12■■■■□ 3.21
GFRA4-201ENST00000290417 FGD6Q6ZV73 1430 aa35.12■■■■□ 3.21
GFRA4-201ENST00000290417 A2MP01023 1474 aa35.09■■■■□ 3.21
GFRA4-201ENST00000290417 TSPY4P0CV99 314 aa35.08■■■■□ 3.21
GFRA4-201ENST00000290417 TSPY10P0CW01 314 aa35.08■■■■□ 3.21
GFRA4-201ENST00000290417 PLXNC1O60486 1568 aa35.06■■■■□ 3.2
GFRA4-201ENST00000290417 PPARGC1BQ86YN6 1023 aaKnown RBP35.04■■■■□ 3.2
GFRA4-201ENST00000290417 TCOF1Q13428 1488 aaKnown RBP35.03■■■■□ 3.2
GFRA4-201ENST00000290417 MAST1Q9Y2H9 1570 aa35.01■■■■□ 3.2
GFRA4-201ENST00000290417 PLPPR3Q6T4P5 718 aa34.99■■■■□ 3.19
GFRA4-201ENST00000290417 CROCC2H7BZ55 1655 aa34.98■■■■□ 3.19
GFRA4-201ENST00000290417 DNMT1P26358 1616 aaKnown RBP34.95■■■■□ 3.19
GFRA4-201ENST00000290417 DHX29Q7Z478 1369 aaKnown RBP34.95■■■■□ 3.19
GFRA4-201ENST00000290417 ABCC5O15440 1437 aa34.94■■■■□ 3.18
GFRA4-201ENST00000290417 ESF1Q9H501 851 aaKnown RBP34.92■■■■□ 3.18
GFRA4-201ENST00000290417 DAPK1P53355 1430 aa34.92■■■■□ 3.18
GFRA4-201ENST00000290417 FAM50AQ14320 339 aaKnown RBP34.91■■■■□ 3.18
GFRA4-201ENST00000290417 SHANK2Q9UPX8 1470 aa34.9■■■■□ 3.18
GFRA4-201ENST00000290417 GGT6Q6P531 493 aa34.88■■■■□ 3.17
GFRA4-201ENST00000290417 KIF3BO15066 747 aa34.83■■■■□ 3.17
GFRA4-201ENST00000290417 CEBPAP49715 358 aaPredicted RBP34.83■■■■□ 3.17
GFRA4-201ENST00000290417 C3P01024 1663 aa34.83■■■■□ 3.17
GFRA4-201ENST00000290417 CNTLNQ9NXG0 1405 aa34.82■■■■□ 3.17
GFRA4-201ENST00000290417 CLTCQ00610 1675 aaKnown RBP34.81■■■■□ 3.16
GFRA4-201ENST00000290417 CHIC2Q9UKJ5 165 aa34.79■■■■□ 3.16
GFRA4-201ENST00000290417 MROH2AA6NES4 1674 aa34.78■■■■□ 3.16
GFRA4-201ENST00000290417 DUOX2Q9NRD8 1548 aa34.77■■■■□ 3.16
GFRA4-201ENST00000290417 KIF15Q9NS87 1388 aa34.76■■■■□ 3.16
GFRA4-201ENST00000290417 RRP7BPQ9NSQ0 103 aa34.76■■■■□ 3.16
GFRA4-201ENST00000290417 EIF2AK4Q9P2K8 1649 aaKnown RBP34.74■■■■□ 3.15
GFRA4-201ENST00000290417 PPP6R1Q9UPN7 881 aa34.73■■■■□ 3.15
GFRA4-201ENST00000290417 ANKRD30AQ9BXX3 1397 aa34.72■■■■□ 3.15
GFRA4-201ENST00000290417 ZMYM3Q14202 1370 aa34.7■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms