RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 ARHGAP5Q13017 1502 aa30.01■■■□□ 2.4
KRTCAP3-201ENST00000288873 GPATCH8Q9UKJ3 1502 aaKnown RBP30.01■■■□□ 2.4
KRTCAP3-201ENST00000288873 NEO1Q92859 1461 aa30.01■■■□□ 2.4
KRTCAP3-201ENST00000288873 CFAP74Q9C0B2 1584 aa30.01■■■□□ 2.39
KRTCAP3-201ENST00000288873 EFCAB2Q5VUJ9 269 aa30■■■□□ 2.39
KRTCAP3-201ENST00000288873 PHLDB1Q86UU1 1377 aa29.98■■■□□ 2.39
KRTCAP3-201ENST00000288873 AKNAQ7Z591 1439 aa29.96■■■□□ 2.39
KRTCAP3-201ENST00000288873 ITSN2Q9NZM3 1697 aa29.96■■■□□ 2.39
KRTCAP3-201ENST00000288873 PPARGC1BQ86YN6 1023 aaKnown RBP29.93■■■□□ 2.38
KRTCAP3-201ENST00000288873 CFDP1Q9UEE9 299 aaPredicted RBP29.93■■■□□ 2.38
KRTCAP3-201ENST00000288873 COL17A1Q9UMD9 1497 aaPredicted RBP29.92■■■□□ 2.38
KRTCAP3-201ENST00000288873 ZNF777Q9ULD5 760 aaPredicted RBP29.9■■■□□ 2.38
KRTCAP3-201ENST00000288873 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
KRTCAP3-201ENST00000288873 MYOM3Q5VTT5 1437 aa29.85■■■□□ 2.37
KRTCAP3-201ENST00000288873 SCAPERQ9BY12 1400 aa29.85■■■□□ 2.37
KRTCAP3-201ENST00000288873 SAMD9LQ8IVG5 1584 aa29.84■■■□□ 2.37
KRTCAP3-201ENST00000288873 DENND4BO75064 1496 aaPredicted RBP29.82■■■□□ 2.36
KRTCAP3-201ENST00000288873 RAPGEF3O95398 923 aa29.81■■■□□ 2.36
KRTCAP3-201ENST00000288873 ABCC1P33527 1531 aa29.81■■■□□ 2.36
KRTCAP3-201ENST00000288873 KDM4FA0A1W2PPD8 638 aa29.8■■■□□ 2.36
KRTCAP3-201ENST00000288873 ZNF644Q9H582 1327 aaPredicted RBP29.79■■■□□ 2.36
KRTCAP3-201ENST00000288873 MIA2Q96PC5 1412 aa29.77■■■□□ 2.36
KRTCAP3-201ENST00000288873 RICTORQ6R327 1708 aa29.76■■■□□ 2.36
KRTCAP3-201ENST00000288873 ARHGEF12Q9NZN5 1544 aa29.76■■■□□ 2.36
KRTCAP3-201ENST00000288873 PLEKHH2Q8IVE3 1493 aa29.76■■■□□ 2.35
KRTCAP3-201ENST00000288873 FRMPD1Q5SYB0 1578 aa29.76■■■□□ 2.35
KRTCAP3-201ENST00000288873 SYCP2Q9BX26 1530 aa29.75■■■□□ 2.35
KRTCAP3-201ENST00000288873 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
KRTCAP3-201ENST00000288873 POGZQ7Z3K3 1410 aa29.74■■■□□ 2.35
KRTCAP3-201ENST00000288873 HNRNPMP52272 730 aaKnown RBP eCLIP29.74■■■□□ 2.35
KRTCAP3-201ENST00000288873 KIAA1107Q9UPP5 1409 aa29.73■■■□□ 2.35
KRTCAP3-201ENST00000288873 FGD6Q6ZV73 1430 aa29.72■■■□□ 2.35
KRTCAP3-201ENST00000288873 TRAPPC8Q9Y2L5 1435 aa29.71■■■□□ 2.35
KRTCAP3-201ENST00000288873 ZNF518AQ6AHZ1 1483 aa29.69■■■□□ 2.34
KRTCAP3-201ENST00000288873 AFAP1Q8N556 730 aa29.69■■■□□ 2.34
KRTCAP3-201ENST00000288873 PTPN23Q9H3S7 1636 aa29.69■■■□□ 2.34
KRTCAP3-201ENST00000288873 MBD5Q9P267 1494 aa29.65■■■□□ 2.34
KRTCAP3-201ENST00000288873 ZMYM4Q5VZL5 1548 aa29.65■■■□□ 2.34
KRTCAP3-201ENST00000288873 KDM5CP41229 1560 aa29.63■■■□□ 2.33
KRTCAP3-201ENST00000288873 TCOF1Q13428 1488 aaKnown RBP29.62■■■□□ 2.33
KRTCAP3-201ENST00000288873 ARHGEF5Q12774 1597 aa29.59■■■□□ 2.33
KRTCAP3-201ENST00000288873 FAM50AQ14320 339 aaKnown RBP29.58■■■□□ 2.33
KRTCAP3-201ENST00000288873 RSPH4AQ5TD94 716 aa29.58■■■□□ 2.33
KRTCAP3-201ENST00000288873 CCDC141Q6ZP82 1450 aa29.58■■■□□ 2.33
KRTCAP3-201ENST00000288873 MYT1LQ9UL68 1186 aa29.58■■■□□ 2.33
KRTCAP3-201ENST00000288873 MAGI2Q86UL8 1455 aa29.57■■■□□ 2.32
KRTCAP3-201ENST00000288873 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
KRTCAP3-201ENST00000288873 ZFYVE16Q7Z3T8 1539 aa29.55■■■□□ 2.32
KRTCAP3-201ENST00000288873 SPAG9O60271 1321 aaKnown RBP29.55■■■□□ 2.32
KRTCAP3-201ENST00000288873 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
KRTCAP3-201ENST00000288873 YEATS2Q9ULM3 1422 aa29.54■■■□□ 2.32
KRTCAP3-201ENST00000288873 ARHGEF40Q8TER5 1519 aa29.52■■■□□ 2.32
KRTCAP3-201ENST00000288873 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.31
KRTCAP3-201ENST00000288873 INO80Q9ULG1 1556 aaPredicted RBP29.49■■■□□ 2.31
KRTCAP3-201ENST00000288873 TSPY4P0CV99 314 aa29.49■■■□□ 2.31
KRTCAP3-201ENST00000288873 TSPY10P0CW01 314 aa29.49■■■□□ 2.31
KRTCAP3-201ENST00000288873 ATP7AQ04656 1500 aa29.49■■■□□ 2.31
KRTCAP3-201ENST00000288873 DNMT1P26358 1616 aaKnown RBP29.49■■■□□ 2.31
KRTCAP3-201ENST00000288873 RRBP1Q9P2E9 1410 aaKnown RBP29.48■■■□□ 2.31
KRTCAP3-201ENST00000288873 ABCC5O15440 1437 aa29.47■■■□□ 2.31
KRTCAP3-201ENST00000288873 DAPK1P53355 1430 aa29.46■■■□□ 2.31
KRTCAP3-201ENST00000288873 ABCA6Q8N139 1617 aa29.45■■■□□ 2.31
KRTCAP3-201ENST00000288873 DIP2CQ9Y2E4 1556 aa29.45■■■□□ 2.31
KRTCAP3-201ENST00000288873 RTEL1-TNFRSF6BF6WH68 1400 aa29.45■■■□□ 2.3
KRTCAP3-201ENST00000288873 CROCC2H7BZ55 1655 aa29.44■■■□□ 2.3
KRTCAP3-201ENST00000288873 ATP10AO60312 1499 aa29.43■■■□□ 2.3
KRTCAP3-201ENST00000288873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.43■■■□□ 2.3
KRTCAP3-201ENST00000288873 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
KRTCAP3-201ENST00000288873 C9orf84Q5VXU9 1444 aa29.42■■■□□ 2.3
KRTCAP3-201ENST00000288873 SHANK2Q9UPX8 1470 aa29.4■■■□□ 2.3
KRTCAP3-201ENST00000288873 CHIC2Q9UKJ5 165 aa29.36■■■□□ 2.29
KRTCAP3-201ENST00000288873 ITGAEP38570 1179 aa29.35■■■□□ 2.29
KRTCAP3-201ENST00000288873 ADGBQ8N7X0 1667 aa29.34■■■□□ 2.29
KRTCAP3-201ENST00000288873 ARID4BQ4LE39 1312 aaPredicted RBP29.33■■■□□ 2.29
KRTCAP3-201ENST00000288873 REREQ9P2R6 1566 aa29.33■■■□□ 2.29
KRTCAP3-201ENST00000288873 SIGLEC1Q9BZZ2 1709 aa29.33■■■□□ 2.29
KRTCAP3-201ENST00000288873 A2MP01023 1474 aa29.31■■■□□ 2.28
KRTCAP3-201ENST00000288873 PTPRKQ15262 1439 aa29.31■■■□□ 2.28
KRTCAP3-201ENST00000288873 PLXNC1O60486 1568 aa29.3■■■□□ 2.28
KRTCAP3-201ENST00000288873 ANKRD30AQ9BXX3 1397 aa29.27■■■□□ 2.28
KRTCAP3-201ENST00000288873 RRP7BPQ9NSQ0 103 aa29.26■■■□□ 2.27
KRTCAP3-201ENST00000288873 DHX29Q7Z478 1369 aaKnown RBP29.26■■■□□ 2.27
KRTCAP3-201ENST00000288873 ADGRL2O95490 1459 aa29.25■■■□□ 2.27
KRTCAP3-201ENST00000288873 NCOA1Q15788 1441 aa29.24■■■□□ 2.27
KRTCAP3-201ENST00000288873 KIF15Q9NS87 1388 aa29.24■■■□□ 2.27
KRTCAP3-201ENST00000288873 AGLP35573 1532 aa29.23■■■□□ 2.27
KRTCAP3-201ENST00000288873 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.27
KRTCAP3-201ENST00000288873 MLECQ14165 292 aa29.2■■■□□ 2.26
KRTCAP3-201ENST00000288873 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.26
KRTCAP3-201ENST00000288873 ROCK1Q13464 1354 aa29.18■■■□□ 2.26
KRTCAP3-201ENST00000288873 KIF3BO15066 747 aa29.14■■■□□ 2.26
KRTCAP3-201ENST00000288873 ADAMTSL3P82987 1691 aa29.12■■■□□ 2.25
KRTCAP3-201ENST00000288873 ERBINQ96RT1 1412 aa29.11■■■□□ 2.25
KRTCAP3-201ENST00000288873 EIF2AK4Q9P2K8 1649 aaKnown RBP29.11■■■□□ 2.25
KRTCAP3-201ENST00000288873 GGT6Q6P531 493 aa29.09■■■□□ 2.25
KRTCAP3-201ENST00000288873 ANKRD50Q9ULJ7 1429 aa29.07■■■□□ 2.24
KRTCAP3-201ENST00000288873 MADDQ8WXG6 1647 aa29.06■■■□□ 2.24
KRTCAP3-201ENST00000288873 FER1L4A9Z1Z3 1794 aa29.04■■■□□ 2.24
KRTCAP3-201ENST00000288873 RNF17Q9BXT8 1623 aaKnown RBP29.02■■■□□ 2.24
KRTCAP3-201ENST00000288873 NAIPQ13075 1403 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms