RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 DHX57Q6P158 1386 aaKnown RBP11□□□□□ -0.65
TRIM42-201ENST00000286349 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
TRIM42-201ENST00000286349 ABCC10Q5T3U5 1492 aa11□□□□□ -0.65
TRIM42-201ENST00000286349 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
TRIM42-201ENST00000286349 KIF14Q15058 1648 aa10.99□□□□□ -0.65
TRIM42-201ENST00000286349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM42-201ENST00000286349 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
TRIM42-201ENST00000286349 SETD5Q9C0A6 1442 aa10.97□□□□□ -0.65
TRIM42-201ENST00000286349 NCOA2Q15596 1464 aa10.97□□□□□ -0.65
TRIM42-201ENST00000286349 DIP2BQ9P265 1576 aa10.96□□□□□ -0.65
TRIM42-201ENST00000286349 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.66
TRIM42-201ENST00000286349 TRHP20396 242 aaPredicted RBP10.95□□□□□ -0.66
TRIM42-201ENST00000286349 MYOM3Q5VTT5 1437 aa10.95□□□□□ -0.66
TRIM42-201ENST00000286349 GLI2P10070 1586 aa10.95□□□□□ -0.66
TRIM42-201ENST00000286349 RAB3GAP2Q9H2M9 1393 aa10.95□□□□□ -0.66
TRIM42-201ENST00000286349 TTC37Q6PGP7 1564 aa10.95□□□□□ -0.66
TRIM42-201ENST00000286349 GPATCH8Q9UKJ3 1502 aaKnown RBP10.94□□□□□ -0.66
TRIM42-201ENST00000286349 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
TRIM42-201ENST00000286349 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
TRIM42-201ENST00000286349 ITGAEP38570 1179 aa10.93□□□□□ -0.66
TRIM42-201ENST00000286349 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
TRIM42-201ENST00000286349 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
TRIM42-201ENST00000286349 PLCH2O75038 1416 aa10.92□□□□□ -0.66
TRIM42-201ENST00000286349 ZNF644Q9H582 1327 aaPredicted RBP10.92□□□□□ -0.66
TRIM42-201ENST00000286349 KIF13AQ9H1H9 1805 aa10.91□□□□□ -0.66
TRIM42-201ENST00000286349 MAP3K4Q9Y6R4 1608 aa10.9□□□□□ -0.66
TRIM42-201ENST00000286349 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
TRIM42-201ENST00000286349 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
TRIM42-201ENST00000286349 CFDP1Q9UEE9 299 aaPredicted RBP10.9□□□□□ -0.67
TRIM42-201ENST00000286349 DIEXFQ68CQ4 756 aaKnown RBP10.89□□□□□ -0.67
TRIM42-201ENST00000286349 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
TRIM42-201ENST00000286349 KLHL34Q8N239 644 aa10.89□□□□□ -0.67
TRIM42-201ENST00000286349 PLPPR3Q6T4P5 718 aa10.88□□□□□ -0.67
TRIM42-201ENST00000286349 EFCAB2Q5VUJ9 269 aa10.88□□□□□ -0.67
TRIM42-201ENST00000286349 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
TRIM42-201ENST00000286349 HFM1A2PYH4 1435 aa10.87□□□□□ -0.67
TRIM42-201ENST00000286349 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
TRIM42-201ENST00000286349 PPRC1Q5VV67 1664 aaKnown RBP10.87□□□□□ -0.67
TRIM42-201ENST00000286349 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
TRIM42-201ENST00000286349 CDC42BPBQ9Y5S2 1711 aa10.86□□□□□ -0.67
TRIM42-201ENST00000286349 TIMELESSQ9UNS1 1208 aa10.86□□□□□ -0.67
TRIM42-201ENST00000286349 FANCAO15360 1455 aa10.86□□□□□ -0.67
TRIM42-201ENST00000286349 AKNAQ7Z591 1439 aa10.85□□□□□ -0.67
TRIM42-201ENST00000286349 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRIM42-201ENST00000286349 ARAP3Q8WWN8 1544 aa10.85□□□□□ -0.67
TRIM42-201ENST00000286349 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
TRIM42-201ENST00000286349 PREX2Q70Z35 1606 aa10.85□□□□□ -0.67
TRIM42-201ENST00000286349 ARHGAP5Q13017 1502 aa10.85□□□□□ -0.67
TRIM42-201ENST00000286349 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
TRIM42-201ENST00000286349 PKNOX2Q96KN3 472 aa10.84□□□□□ -0.67
TRIM42-201ENST00000286349 MYO5CQ9NQX4 1742 aa10.83□□□□□ -0.67
TRIM42-201ENST00000286349 TSPOAP1O95153 1857 aa10.83□□□□□ -0.68
TRIM42-201ENST00000286349 SAMD9LQ8IVG5 1584 aa10.83□□□□□ -0.68
TRIM42-201ENST00000286349 NEO1Q92859 1461 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 MBD5Q9P267 1494 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 RAPGEF3O95398 923 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 CAMSAP2Q08AD1 1489 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 AFAP1Q8N556 730 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 SCAPERQ9BY12 1400 aa10.82□□□□□ -0.68
TRIM42-201ENST00000286349 TRAPPC8Q9Y2L5 1435 aa10.81□□□□□ -0.68
TRIM42-201ENST00000286349 NAIPQ13075 1403 aa10.81□□□□□ -0.68
TRIM42-201ENST00000286349 TEX14Q8IWB6 1497 aa10.8□□□□□ -0.68
TRIM42-201ENST00000286349 PTPRKQ15262 1439 aa10.8□□□□□ -0.68
TRIM42-201ENST00000286349 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
TRIM42-201ENST00000286349 GCC2Q8IWJ2 1684 aa10.8□□□□□ -0.68
TRIM42-201ENST00000286349 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
TRIM42-201ENST00000286349 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
TRIM42-201ENST00000286349 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
TRIM42-201ENST00000286349 NEUROD1Q13562 356 aa10.79□□□□□ -0.68
TRIM42-201ENST00000286349 ABCC1P33527 1531 aa10.79□□□□□ -0.68
TRIM42-201ENST00000286349 ABCC5O15440 1437 aa10.78□□□□□ -0.68
TRIM42-201ENST00000286349 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
TRIM42-201ENST00000286349 SYCP2Q9BX26 1530 aa10.78□□□□□ -0.68
TRIM42-201ENST00000286349 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
TRIM42-201ENST00000286349 PLEKHH2Q8IVE3 1493 aa10.76□□□□□ -0.69
TRIM42-201ENST00000286349 DNMT1P26358 1616 aaKnown RBP10.76□□□□□ -0.69
TRIM42-201ENST00000286349 POGZQ7Z3K3 1410 aa10.76□□□□□ -0.69
TRIM42-201ENST00000286349 RSPH4AQ5TD94 716 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 CHIC2Q9UKJ5 165 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 DAPK1P53355 1430 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 CFAP74Q9C0B2 1584 aa10.75□□□□□ -0.69
TRIM42-201ENST00000286349 ARHGEF5Q12774 1597 aa10.73□□□□□ -0.69
TRIM42-201ENST00000286349 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
TRIM42-201ENST00000286349 NEFLP07196 543 aa10.72□□□□□ -0.69
TRIM42-201ENST00000286349 TSPY4P0CV99 314 aa10.72□□□□□ -0.69
TRIM42-201ENST00000286349 TSPY10P0CW01 314 aa10.72□□□□□ -0.69
TRIM42-201ENST00000286349 ZNF518AQ6AHZ1 1483 aa10.72□□□□□ -0.69
TRIM42-201ENST00000286349 SPAG9O60271 1321 aaKnown RBP10.72□□□□□ -0.69
TRIM42-201ENST00000286349 PDIA4P13667 645 aaKnown RBP10.72□□□□□ -0.69
TRIM42-201ENST00000286349 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
TRIM42-201ENST00000286349 KDM5CP41229 1560 aa10.71□□□□□ -0.69
TRIM42-201ENST00000286349 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
TRIM42-201ENST00000286349 YEATS2Q9ULM3 1422 aa10.7□□□□□ -0.7
TRIM42-201ENST00000286349 RRP7BPQ9NSQ0 103 aa10.7□□□□□ -0.7
TRIM42-201ENST00000286349 MLH3Q9UHC1 1453 aa10.7□□□□□ -0.7
TRIM42-201ENST00000286349 TONSLQ96HA7 1378 aa10.69□□□□□ -0.7
TRIM42-201ENST00000286349 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms