RNA–Protein interactions for RNA: ENST00000280780.6

FAM53B-201, Transcript of family with sequence similarity 53 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM53B, Length 1,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53B-201ENST00000280780 CDC42BPBQ9Y5S2 1711 aa34.69■■■■□ 3.14
FAM53B-201ENST00000280780 EFCAB2Q5VUJ9 269 aa34.66■■■■□ 3.14
FAM53B-201ENST00000280780 CDC42BPAQ5VT25 1732 aa34.66■■■■□ 3.14
FAM53B-201ENST00000280780 NCOA2Q15596 1464 aa34.63■■■■□ 3.13
FAM53B-201ENST00000280780 ARHGAP5Q13017 1502 aa34.63■■■■□ 3.13
FAM53B-201ENST00000280780 GPATCH8Q9UKJ3 1502 aaKnown RBP34.63■■■■□ 3.13
FAM53B-201ENST00000280780 CFAP74Q9C0B2 1584 aa34.61■■■■□ 3.13
FAM53B-201ENST00000280780 PREX2Q70Z35 1606 aa34.61■■■■□ 3.13
FAM53B-201ENST00000280780 FRMPD1Q5SYB0 1578 aa34.6■■■■□ 3.13
FAM53B-201ENST00000280780 SCAPERQ9BY12 1400 aa34.57■■■■□ 3.12
FAM53B-201ENST00000280780 ADGRL1O94910 1474 aa34.57■■■■□ 3.12
FAM53B-201ENST00000280780 DENND4BO75064 1496 aaPredicted RBP34.56■■■■□ 3.12
FAM53B-201ENST00000280780 RICTORQ6R327 1708 aa34.54■■■■□ 3.12
FAM53B-201ENST00000280780 CCNB3Q8WWL7 1395 aa34.54■■■■□ 3.12
FAM53B-201ENST00000280780 ZNF777Q9ULD5 760 aaPredicted RBP34.5■■■■□ 3.11
FAM53B-201ENST00000280780 ARHGEF12Q9NZN5 1544 aa34.49■■■■□ 3.11
FAM53B-201ENST00000280780 CFDP1Q9UEE9 299 aaPredicted RBP34.48■■■■□ 3.11
FAM53B-201ENST00000280780 AFAP1Q8N556 730 aa34.45■■■■□ 3.11
FAM53B-201ENST00000280780 ZNF644Q9H582 1327 aaPredicted RBP34.45■■■■□ 3.1
FAM53B-201ENST00000280780 SAMD9LQ8IVG5 1584 aa34.44■■■■□ 3.1
FAM53B-201ENST00000280780 POGZQ7Z3K3 1410 aa34.44■■■■□ 3.1
FAM53B-201ENST00000280780 ITSN2Q9NZM3 1697 aa34.42■■■■□ 3.1
FAM53B-201ENST00000280780 ABCC1P33527 1531 aa34.42■■■■□ 3.1
FAM53B-201ENST00000280780 MYOM3Q5VTT5 1437 aa34.4■■■■□ 3.1
FAM53B-201ENST00000280780 TRAPPC8Q9Y2L5 1435 aa34.4■■■■□ 3.1
FAM53B-201ENST00000280780 HNRNPMP52272 730 aaKnown RBP eCLIP34.4■■■■□ 3.12e-6■■■■□ 22.4
FAM53B-201ENST00000280780 ZMYM4Q5VZL5 1548 aa34.35■■■■□ 3.09
FAM53B-201ENST00000280780 YEATS2Q9ULM3 1422 aa34.35■■■■□ 3.09
FAM53B-201ENST00000280780 FGD6Q6ZV73 1430 aa34.33■■■■□ 3.09
FAM53B-201ENST00000280780 SYCP2Q9BX26 1530 aa34.32■■■■□ 3.08
FAM53B-201ENST00000280780 ZNF518AQ6AHZ1 1483 aa34.32■■■■□ 3.08
FAM53B-201ENST00000280780 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
FAM53B-201ENST00000280780 KDM5CP41229 1560 aa34.29■■■■□ 3.08
FAM53B-201ENST00000280780 RRBP1Q9P2E9 1410 aaKnown RBP34.28■■■■□ 3.08
FAM53B-201ENST00000280780 KIAA1107Q9UPP5 1409 aa34.27■■■■□ 3.08
FAM53B-201ENST00000280780 MIA2Q96PC5 1412 aa34.27■■■■□ 3.08
FAM53B-201ENST00000280780 PTPN23Q9H3S7 1636 aa34.26■■■■□ 3.08
FAM53B-201ENST00000280780 ZFYVE16Q7Z3T8 1539 aa34.25■■■■□ 3.07
FAM53B-201ENST00000280780 ARHGEF40Q8TER5 1519 aa34.25■■■■□ 3.07
FAM53B-201ENST00000280780 MAGI2Q86UL8 1455 aa34.25■■■■□ 3.07
FAM53B-201ENST00000280780 MBD5Q9P267 1494 aa34.24■■■■□ 3.07
FAM53B-201ENST00000280780 PLEKHH2Q8IVE3 1493 aa34.22■■■■□ 3.07
FAM53B-201ENST00000280780 SIGLEC1Q9BZZ2 1709 aa34.21■■■■□ 3.07
FAM53B-201ENST00000280780 CAMSAP2Q08AD1 1489 aa34.21■■■■□ 3.07
FAM53B-201ENST00000280780 TCOF1Q13428 1488 aaKnown RBP34.2■■■■□ 3.06
FAM53B-201ENST00000280780 MLH3Q9UHC1 1453 aa34.19■■■■□ 3.06
FAM53B-201ENST00000280780 MYT1LQ9UL68 1186 aa34.19■■■■□ 3.06
FAM53B-201ENST00000280780 HECW2Q9P2P5 1572 aa34.18■■■■□ 3.06
FAM53B-201ENST00000280780 KIDINS220Q9ULH0 1771 aa34.16■■■■□ 3.06
FAM53B-201ENST00000280780 ATP10AO60312 1499 aa34.13■■■■□ 3.05
FAM53B-201ENST00000280780 SPAG9O60271 1321 aaKnown RBP34.13■■■■□ 3.05
FAM53B-201ENST00000280780 ABCA6Q8N139 1617 aa34.11■■■■□ 3.05
FAM53B-201ENST00000280780 DIP2CQ9Y2E4 1556 aa34.11■■■■□ 3.05
FAM53B-201ENST00000280780 ARID4BQ4LE39 1312 aaPredicted RBP34.1■■■■□ 3.05
FAM53B-201ENST00000280780 FAM50AQ14320 339 aaKnown RBP34.08■■■■□ 3.05
FAM53B-201ENST00000280780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.07■■■■□ 3.04
FAM53B-201ENST00000280780 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
FAM53B-201ENST00000280780 TRIM26Q12899 539 aaPredicted RBP34.04■■■■□ 3.04
FAM53B-201ENST00000280780 INO80Q9ULG1 1556 aaPredicted RBP34.03■■■■□ 3.04
FAM53B-201ENST00000280780 ATP7AQ04656 1500 aa34.03■■■■□ 3.04
FAM53B-201ENST00000280780 CCDC141Q6ZP82 1450 aa34.03■■■■□ 3.04
FAM53B-201ENST00000280780 ARHGEF5Q12774 1597 aa34.02■■■■□ 3.04
FAM53B-201ENST00000280780 DNMT1P26358 1616 aaKnown RBP34.01■■■■□ 3.04
FAM53B-201ENST00000280780 BCORL1Q5H9F3 1711 aa34.01■■■■□ 3.03
FAM53B-201ENST00000280780 AEBP2Q6ZN18 517 aaPredicted RBP34.01■■■■□ 3.03
FAM53B-201ENST00000280780 RSPH4AQ5TD94 716 aa34■■■■□ 3.03
FAM53B-201ENST00000280780 MLECQ14165 292 aa33.99■■■■□ 3.03
FAM53B-201ENST00000280780 ADAMTSL3P82987 1691 aa33.97■■■■□ 3.03
FAM53B-201ENST00000280780 CROCC2H7BZ55 1655 aa33.97■■■■□ 3.03
FAM53B-201ENST00000280780 RTEL1-TNFRSF6BF6WH68 1400 aa33.94■■■■□ 3.02
FAM53B-201ENST00000280780 REREQ9P2R6 1566 aa33.94■■■■□ 3.02
FAM53B-201ENST00000280780 ABCC5O15440 1437 aa33.93■■■■□ 3.02
FAM53B-201ENST00000280780 DAPK1P53355 1430 aa33.93■■■■□ 3.02
FAM53B-201ENST00000280780 PTPRKQ15262 1439 aa33.93■■■■□ 3.02
FAM53B-201ENST00000280780 TSPY4P0CV99 314 aa33.92■■■■□ 3.02
FAM53B-201ENST00000280780 TSPY10P0CW01 314 aa33.92■■■■□ 3.02
FAM53B-201ENST00000280780 ITGAEP38570 1179 aa33.89■■■■□ 3.02
FAM53B-201ENST00000280780 MADDQ8WXG6 1647 aa33.88■■■■□ 3.01
FAM53B-201ENST00000280780 A2MP01023 1474 aa33.87■■■■□ 3.01
FAM53B-201ENST00000280780 ADGBQ8N7X0 1667 aa33.85■■■■□ 3.01
FAM53B-201ENST00000280780 AGLP35573 1532 aa33.85■■■■□ 3.01
FAM53B-201ENST00000280780 PLXNC1O60486 1568 aa33.83■■■■□ 3.01
FAM53B-201ENST00000280780 MAST1Q9Y2H9 1570 aa33.83■■■■□ 3.01
FAM53B-201ENST00000280780 SHANK2Q9UPX8 1470 aa33.82■■■■□ 3
FAM53B-201ENST00000280780 DHX29Q7Z478 1369 aaKnown RBP33.8■■■■□ 3
FAM53B-201ENST00000280780 PCGF6Q9BYE7 350 aa33.8■■■■□ 3
FAM53B-201ENST00000280780 CHIC2Q9UKJ5 165 aa33.78■■■■□ 3
FAM53B-201ENST00000280780 PTPRMP28827 1452 aa33.78■■■■□ 3
FAM53B-201ENST00000280780 RIMS1Q86UR5 1692 aaKnown RBP33.77■■■■□ 3
FAM53B-201ENST00000280780 FER1L4A9Z1Z3 1794 aa33.74■■■□□ 2.99
FAM53B-201ENST00000280780 RRP7BPQ9NSQ0 103 aa33.72■■■□□ 2.99
FAM53B-201ENST00000280780 ADGRL2O95490 1459 aa33.71■■■□□ 2.99
FAM53B-201ENST00000280780 GGT6Q6P531 493 aa33.7■■■□□ 2.99
FAM53B-201ENST00000280780 PLPPR3Q6T4P5 718 aa33.69■■■□□ 2.98
FAM53B-201ENST00000280780 KIF3BO15066 747 aa33.68■■■□□ 2.98
FAM53B-201ENST00000280780 CEBPAP49715 358 aaPredicted RBP33.66■■■□□ 2.98
FAM53B-201ENST00000280780 ROCK1Q13464 1354 aa33.66■■■□□ 2.98
FAM53B-201ENST00000280780 NCOA1Q15788 1441 aa33.65■■■□□ 2.98
FAM53B-201ENST00000280780 KIF15Q9NS87 1388 aa33.63■■■□□ 2.97
FAM53B-201ENST00000280780 GCC2Q8IWJ2 1684 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms