RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
PRDM16-201ENST00000270722 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
PRDM16-201ENST00000270722 CEP89Q96ST8 783 aa16.68■□□□□ 0.26
PRDM16-201ENST00000270722 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
PRDM16-201ENST00000270722 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
PRDM16-201ENST00000270722 TPM4P67936 248 aa16.67■□□□□ 0.26
PRDM16-201ENST00000270722 G3V3G9 751 aa16.67■□□□□ 0.26
PRDM16-201ENST00000270722 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
PRDM16-201ENST00000270722 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
PRDM16-201ENST00000270722 RGL3Q3MIN7 710 aa16.66■□□□□ 0.26
PRDM16-201ENST00000270722 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
PRDM16-201ENST00000270722 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
PRDM16-201ENST00000270722 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
PRDM16-201ENST00000270722 TMF1P82094 1093 aa16.63■□□□□ 0.25
PRDM16-201ENST00000270722 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
PRDM16-201ENST00000270722 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
PRDM16-201ENST00000270722 PDE4CQ08493 712 aa16.61■□□□□ 0.25
PRDM16-201ENST00000270722 HDGFL2Q7Z4V5 671 aaPredicted RBP16.61■□□□□ 0.25
PRDM16-201ENST00000270722 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
PRDM16-201ENST00000270722 SPAG9O60271 1321 aaKnown RBP16.61■□□□□ 0.25
PRDM16-201ENST00000270722 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
PRDM16-201ENST00000270722 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
PRDM16-201ENST00000270722 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
PRDM16-201ENST00000270722 DRC7Q8IY82 874 aa16.6■□□□□ 0.25
PRDM16-201ENST00000270722 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
PRDM16-201ENST00000270722 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
PRDM16-201ENST00000270722 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
PRDM16-201ENST00000270722 ZNF771Q7L3S4 317 aaPredicted RBP16.59■□□□□ 0.25
PRDM16-201ENST00000270722 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
PRDM16-201ENST00000270722 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.24
PRDM16-201ENST00000270722 GORABQ5T7V8 394 aa16.58■□□□□ 0.24
PRDM16-201ENST00000270722 CCDC66A2RUB6 948 aa16.58■□□□□ 0.24
PRDM16-201ENST00000270722 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
PRDM16-201ENST00000270722 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
PRDM16-201ENST00000270722 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
PRDM16-201ENST00000270722 GPS2Q13227 327 aa16.56■□□□□ 0.24
PRDM16-201ENST00000270722 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
PRDM16-201ENST00000270722 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
PRDM16-201ENST00000270722 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
PRDM16-201ENST00000270722 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
PRDM16-201ENST00000270722 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
PRDM16-201ENST00000270722 TAF7LQ5H9L4 462 aa16.54■□□□□ 0.24
PRDM16-201ENST00000270722 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
PRDM16-201ENST00000270722 LRRFIP1Q32MZ4 808 aaKnown RBP16.54■□□□□ 0.24
PRDM16-201ENST00000270722 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
PRDM16-201ENST00000270722 EID1Q9Y6B2 187 aa16.53■□□□□ 0.24
PRDM16-201ENST00000270722 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
PRDM16-201ENST00000270722 HMMRO75330 724 aa16.52■□□□□ 0.24
PRDM16-201ENST00000270722 STK31Q9BXU1 1019 aa16.52■□□□□ 0.24
PRDM16-201ENST00000270722 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.23
PRDM16-201ENST00000270722 GBP4Q96PP9 640 aa16.5■□□□□ 0.23
PRDM16-201ENST00000270722 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
PRDM16-201ENST00000270722 RASSF8Q8NHQ8 419 aa16.5■□□□□ 0.23
PRDM16-201ENST00000270722 MORC1Q86VD1 984 aa16.49■□□□□ 0.23
PRDM16-201ENST00000270722 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
PRDM16-201ENST00000270722 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
PRDM16-201ENST00000270722 LMOD3Q0VAK6 560 aa16.48■□□□□ 0.23
PRDM16-201ENST00000270722 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
PRDM16-201ENST00000270722 TCEAL9Q9UHQ7 104 aa16.48■□□□□ 0.23
PRDM16-201ENST00000270722 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
PRDM16-201ENST00000270722 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
PRDM16-201ENST00000270722 TPM3P06753 285 aa16.47■□□□□ 0.23
PRDM16-201ENST00000270722 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
PRDM16-201ENST00000270722 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
PRDM16-201ENST00000270722 RRP12Q5JTH9 1297 aaKnown RBP16.46■□□□□ 0.23
PRDM16-201ENST00000270722 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
PRDM16-201ENST00000270722 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
PRDM16-201ENST00000270722 FOXD1Q16676 465 aa16.45■□□□□ 0.22
PRDM16-201ENST00000270722 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
PRDM16-201ENST00000270722 MARCH6O60337 910 aa16.44■□□□□ 0.22
PRDM16-201ENST00000270722 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
PRDM16-201ENST00000270722 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
PRDM16-201ENST00000270722 PHF14O94880 888 aa16.44■□□□□ 0.22
PRDM16-201ENST00000270722 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
PRDM16-201ENST00000270722 FRAT2O75474 233 aaPredicted RBP16.43■□□□□ 0.22
PRDM16-201ENST00000270722 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
PRDM16-201ENST00000270722 RGS3P49796 1198 aa16.42■□□□□ 0.22
PRDM16-201ENST00000270722 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
PRDM16-201ENST00000270722 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
PRDM16-201ENST00000270722 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
PRDM16-201ENST00000270722 TPM2P07951 284 aa16.42■□□□□ 0.22
PRDM16-201ENST00000270722 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
PRDM16-201ENST00000270722 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
PRDM16-201ENST00000270722 TRIM34Q9BYJ4 488 aa16.4■□□□□ 0.22
PRDM16-201ENST00000270722 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
PRDM16-201ENST00000270722 CCDC70Q6NSX1 233 aa16.4■□□□□ 0.22
PRDM16-201ENST00000270722 TSPYL1Q9H0U9 437 aa16.39■□□□□ 0.21
PRDM16-201ENST00000270722 NACADO15069 1562 aa16.39■□□□□ 0.21
PRDM16-201ENST00000270722 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
PRDM16-201ENST00000270722 TPM1P09493 284 aa16.38■□□□□ 0.21
PRDM16-201ENST00000270722 RWDD1Q9H446 243 aaPredicted RBP16.38■□□□□ 0.21
PRDM16-201ENST00000270722 MLECQ14165 292 aa16.37■□□□□ 0.21
PRDM16-201ENST00000270722 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
PRDM16-201ENST00000270722 HSP90B1P14625 803 aaKnown RBP16.37■□□□□ 0.21
PRDM16-201ENST00000270722 ARID3AQ99856 593 aa16.37■□□□□ 0.21
PRDM16-201ENST00000270722 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
PRDM16-201ENST00000270722 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
PRDM16-201ENST00000270722 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
PRDM16-201ENST00000270722 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
PRDM16-201ENST00000270722 CPLX2Q6PUV4 134 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms