RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
GTF3C3-201ENST00000263956 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
GTF3C3-201ENST00000263956 RAB3GAP2Q9H2M9 1393 aa11.6□□□□□ -0.55
GTF3C3-201ENST00000263956 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
GTF3C3-201ENST00000263956 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
GTF3C3-201ENST00000263956 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
GTF3C3-201ENST00000263956 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
GTF3C3-201ENST00000263956 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
GTF3C3-201ENST00000263956 MAP3K1Q13233 1512 aa11.58□□□□□ -0.55
GTF3C3-201ENST00000263956 MPHOSPH9Q99550 1183 aa11.58□□□□□ -0.56
GTF3C3-201ENST00000263956 ATP10BO94823 1461 aa11.58□□□□□ -0.56
GTF3C3-201ENST00000263956 RAPGEF6Q8TEU7 1601 aa11.58□□□□□ -0.56
GTF3C3-201ENST00000263956 HDGFP51858 240 aaKnown RBP11.56□□□□□ -0.56
GTF3C3-201ENST00000263956 NUP153P49790 1475 aaKnown RBP11.56□□□□□ -0.56
GTF3C3-201ENST00000263956 SCAPERQ9BY12 1400 aa11.56□□□□□ -0.56
GTF3C3-201ENST00000263956 KIF15Q9NS87 1388 aa11.56□□□□□ -0.56
GTF3C3-201ENST00000263956 ARHGEF11O15085 1522 aa11.56□□□□□ -0.56
GTF3C3-201ENST00000263956 ASXL2Q76L83 1435 aa11.55□□□□□ -0.56
GTF3C3-201ENST00000263956 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
GTF3C3-201ENST00000263956 SIN3AQ96ST3 1273 aa11.55□□□□□ -0.56
GTF3C3-201ENST00000263956 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
GTF3C3-201ENST00000263956 KIF14Q15058 1648 aa11.54□□□□□ -0.56
GTF3C3-201ENST00000263956 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
GTF3C3-201ENST00000263956 CHD1O14646 1710 aa11.53□□□□□ -0.56
GTF3C3-201ENST00000263956 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
GTF3C3-201ENST00000263956 RRBP1Q9P2E9 1410 aaKnown RBP11.53□□□□□ -0.56
GTF3C3-201ENST00000263956 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
GTF3C3-201ENST00000263956 FOXD1Q16676 465 aa11.52□□□□□ -0.56
GTF3C3-201ENST00000263956 TIMELESSQ9UNS1 1208 aa11.51□□□□□ -0.57
GTF3C3-201ENST00000263956 WDR7Q9Y4E6 1490 aa11.51□□□□□ -0.57
GTF3C3-201ENST00000263956 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
GTF3C3-201ENST00000263956 C9orf84Q5VXU9 1444 aa11.5□□□□□ -0.57
GTF3C3-201ENST00000263956 DCAF11Q8TEB1 546 aa11.49□□□□□ -0.57
GTF3C3-201ENST00000263956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
GTF3C3-201ENST00000263956 SAMD9Q5K651 1589 aa11.49□□□□□ -0.57
GTF3C3-201ENST00000263956 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
GTF3C3-201ENST00000263956 EIF4G2P78344 907 aaKnown RBP eCLIP11.48□□□□□ -0.57
GTF3C3-201ENST00000263956 ADGRL1O94910 1474 aa11.47□□□□□ -0.57
GTF3C3-201ENST00000263956 FANCAO15360 1455 aa11.47□□□□□ -0.57
GTF3C3-201ENST00000263956 PLCH2O75038 1416 aa11.46□□□□□ -0.58
GTF3C3-201ENST00000263956 DAPK1P53355 1430 aa11.46□□□□□ -0.58
GTF3C3-201ENST00000263956 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 ANP32CO43423 234 aa11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 DENND4BO75064 1496 aaPredicted RBP11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 TEX14Q8IWB6 1497 aa11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
GTF3C3-201ENST00000263956 AKNAQ7Z591 1439 aa11.44□□□□□ -0.58
GTF3C3-201ENST00000263956 CAMSAP2Q08AD1 1489 aa11.44□□□□□ -0.58
GTF3C3-201ENST00000263956 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
GTF3C3-201ENST00000263956 UHRF1BP1LA0JNW5 1464 aa11.43□□□□□ -0.58
GTF3C3-201ENST00000263956 EID1Q9Y6B2 187 aa11.43□□□□□ -0.58
GTF3C3-201ENST00000263956 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
GTF3C3-201ENST00000263956 POGKQ9P215 609 aa11.42□□□□□ -0.58
GTF3C3-201ENST00000263956 CCDC144AA2RUR9 1427 aa11.41□□□□□ -0.58
GTF3C3-201ENST00000263956 POGZQ7Z3K3 1410 aa11.41□□□□□ -0.58
GTF3C3-201ENST00000263956 ROCK1Q13464 1354 aa11.41□□□□□ -0.58
GTF3C3-201ENST00000263956 ABCC5O15440 1437 aa11.4□□□□□ -0.58
GTF3C3-201ENST00000263956 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.59
GTF3C3-201ENST00000263956 CDCA8Q53HL2 280 aa11.4□□□□□ -0.59
GTF3C3-201ENST00000263956 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
GTF3C3-201ENST00000263956 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
GTF3C3-201ENST00000263956 ABCA8O94911 1581 aa11.39□□□□□ -0.59
GTF3C3-201ENST00000263956 SLC24A1O60721 1099 aa11.38□□□□□ -0.59
GTF3C3-201ENST00000263956 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
GTF3C3-201ENST00000263956 KDM5BQ9UGL1 1544 aa11.37□□□□□ -0.59
GTF3C3-201ENST00000263956 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
GTF3C3-201ENST00000263956 CLASP1Q7Z460 1538 aa11.37□□□□□ -0.59
GTF3C3-201ENST00000263956 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
GTF3C3-201ENST00000263956 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
GTF3C3-201ENST00000263956 DDX10Q13206 875 aaKnown RBP11.36□□□□□ -0.59
GTF3C3-201ENST00000263956 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
GTF3C3-201ENST00000263956 TMC1Q8TDI8 760 aa11.35□□□□□ -0.59
GTF3C3-201ENST00000263956 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
GTF3C3-201ENST00000263956 STK26Q9P289 416 aa11.34□□□□□ -0.59
GTF3C3-201ENST00000263956 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
GTF3C3-201ENST00000263956 NAIPQ13075 1403 aa11.33□□□□□ -0.6
GTF3C3-201ENST00000263956 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
GTF3C3-201ENST00000263956 ITSN2Q9NZM3 1697 aa11.33□□□□□ -0.6
GTF3C3-201ENST00000263956 ZNF518AQ6AHZ1 1483 aa11.33□□□□□ -0.6
GTF3C3-201ENST00000263956 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
GTF3C3-201ENST00000263956 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
GTF3C3-201ENST00000263956 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
GTF3C3-201ENST00000263956 PPP6R1Q9UPN7 881 aa11.31□□□□□ -0.6
GTF3C3-201ENST00000263956 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
GTF3C3-201ENST00000263956 ABCC10Q5T3U5 1492 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 TRAPPC8Q9Y2L5 1435 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 NEFMP07197 916 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 AEBP2Q6ZN18 517 aaPredicted RBP11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 TMF1P82094 1093 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 SLC52A1Q9NWF4 448 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
GTF3C3-201ENST00000263956 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF3C3-201ENST00000263956 TCOF1Q13428 1488 aaKnown RBP11.27□□□□□ -0.6
GTF3C3-201ENST00000263956 NEO1Q92859 1461 aa11.27□□□□□ -0.6
GTF3C3-201ENST00000263956 NEFLP07196 543 aa11.27□□□□□ -0.61
GTF3C3-201ENST00000263956 SRPK2P78362 688 aaKnown RBP11.26□□□□□ -0.61
GTF3C3-201ENST00000263956 THEMISQ8N1K5 641 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms