RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 PTPRKQ15262 1439 aa35.74■■■■□ 3.31
EPCAM-201ENST00000263735 HRCP23327 699 aa35.74■■■■□ 3.31
EPCAM-201ENST00000263735 DAPK1P53355 1430 aa35.71■■■■□ 3.31
EPCAM-201ENST00000263735 GCC2Q8IWJ2 1684 aa35.7■■■■□ 3.31
EPCAM-201ENST00000263735 SAMD9LQ8IVG5 1584 aa35.7■■■■□ 3.31
EPCAM-201ENST00000263735 KCNH8Q96L42 1107 aa35.69■■■■□ 3.3
EPCAM-201ENST00000263735 ARHGAP5Q13017 1502 aa35.69■■■■□ 3.3
EPCAM-201ENST00000263735 ADGBQ8N7X0 1667 aa35.69■■■■□ 3.3
EPCAM-201ENST00000263735 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
EPCAM-201ENST00000263735 ZNF644Q9H582 1327 aaPredicted RBP35.68■■■■□ 3.3
EPCAM-201ENST00000263735 ARAP3Q8WWN8 1544 aa35.67■■■■□ 3.3
EPCAM-201ENST00000263735 MAPKBP1O60336 1514 aa35.64■■■■□ 3.3
EPCAM-201ENST00000263735 ARHGEF5Q12774 1597 aa35.64■■■■□ 3.3
EPCAM-201ENST00000263735 HFM1A2PYH4 1435 aa35.64■■■■□ 3.3
EPCAM-201ENST00000263735 AKNAQ7Z591 1439 aa35.64■■■■□ 3.3
EPCAM-201ENST00000263735 ABCC5O15440 1437 aa35.63■■■■□ 3.29
EPCAM-201ENST00000263735 CYB5RLQ6IPT4 315 aa35.63■■■■□ 3.29
EPCAM-201ENST00000263735 CCER1Q8TC90 406 aaPredicted RBP35.63■■■■□ 3.29
EPCAM-201ENST00000263735 PLCH2O75038 1416 aa35.63■■■■□ 3.29
EPCAM-201ENST00000263735 RAB3GAP2Q9H2M9 1393 aa35.61■■■■□ 3.29
EPCAM-201ENST00000263735 ZNF777Q9ULD5 760 aaPredicted RBP35.61■■■■□ 3.29
EPCAM-201ENST00000263735 PLEKHH2Q8IVE3 1493 aa35.55■■■■□ 3.28
EPCAM-201ENST00000263735 NAIPQ13075 1403 aa35.55■■■■□ 3.28
EPCAM-201ENST00000263735 ROCK1Q13464 1354 aa35.54■■■■□ 3.28
EPCAM-201ENST00000263735 SHANK2Q9UPX8 1470 aa35.54■■■■□ 3.28
EPCAM-201ENST00000263735 ZEB1P37275 1124 aaPredicted RBP35.53■■■■□ 3.28
EPCAM-201ENST00000263735 SYCP2Q9BX26 1530 aa35.51■■■■□ 3.28
EPCAM-201ENST00000263735 MBD5Q9P267 1494 aa35.5■■■■□ 3.27
EPCAM-201ENST00000263735 ADGRL2O95490 1459 aa35.49■■■■□ 3.27
EPCAM-201ENST00000263735 ABCC1P33527 1531 aa35.48■■■■□ 3.27
EPCAM-201ENST00000263735 KIAA1107Q9UPP5 1409 aa35.47■■■■□ 3.27
EPCAM-201ENST00000263735 CCDC141Q6ZP82 1450 aa35.47■■■■□ 3.27
EPCAM-201ENST00000263735 CHIC2Q9UKJ5 165 aa35.46■■■■□ 3.27
EPCAM-201ENST00000263735 EFCAB2Q5VUJ9 269 aa35.44■■■■□ 3.26
EPCAM-201ENST00000263735 DHX57Q6P158 1386 aaKnown RBP35.44■■■■□ 3.26
EPCAM-201ENST00000263735 CFAP74Q9C0B2 1584 aa35.43■■■■□ 3.26
EPCAM-201ENST00000263735 MAST1Q9Y2H9 1570 aa35.42■■■■□ 3.26
EPCAM-201ENST00000263735 RSPH4AQ5TD94 716 aa35.42■■■■□ 3.26
EPCAM-201ENST00000263735 FANCAO15360 1455 aa35.4■■■■□ 3.26
EPCAM-201ENST00000263735 C9orf84Q5VXU9 1444 aa35.39■■■■□ 3.26
EPCAM-201ENST00000263735 RRP7BPQ9NSQ0 103 aa35.38■■■■□ 3.25
EPCAM-201ENST00000263735 GLI2P10070 1586 aa35.38■■■■□ 3.25
EPCAM-201ENST00000263735 HNRNPMP52272 730 aaKnown RBP eCLIP35.37■■■■□ 3.25
EPCAM-201ENST00000263735 NCOA1Q15788 1441 aa35.37■■■■□ 3.25
EPCAM-201ENST00000263735 MAP3K4Q9Y6R4 1608 aa35.37■■■■□ 3.25
EPCAM-201ENST00000263735 KDM6BO15054 1643 aa35.36■■■■□ 3.25
EPCAM-201ENST00000263735 ARHGEF12Q9NZN5 1544 aa35.35■■■■□ 3.25
EPCAM-201ENST00000263735 ANKRD30AQ9BXX3 1397 aa35.34■■■■□ 3.25
EPCAM-201ENST00000263735 CLSPNQ9HAW4 1339 aa35.33■■■■□ 3.25
EPCAM-201ENST00000263735 TSPY4P0CV99 314 aa35.32■■■■□ 3.24
EPCAM-201ENST00000263735 TSPY10P0CW01 314 aa35.32■■■■□ 3.24
EPCAM-201ENST00000263735 CD109Q6YHK3 1445 aa35.31■■■■□ 3.24
EPCAM-201ENST00000263735 DIP2BQ9P265 1576 aa35.31■■■■□ 3.24
EPCAM-201ENST00000263735 PLXNC1O60486 1568 aa35.3■■■■□ 3.24
EPCAM-201ENST00000263735 ACIN1Q9UKV3 1341 aaKnown RBP35.26■■■■□ 3.24
EPCAM-201ENST00000263735 ADGRL1O94910 1474 aa35.24■■■■□ 3.23
EPCAM-201ENST00000263735 KIF13AQ9H1H9 1805 aa35.19■■■■□ 3.22
EPCAM-201ENST00000263735 TRAPPC8Q9Y2L5 1435 aa35.19■■■■□ 3.22
EPCAM-201ENST00000263735 NEO1Q92859 1461 aa35.17■■■■□ 3.22
EPCAM-201ENST00000263735 INO80Q9ULG1 1556 aaPredicted RBP35.15■■■■□ 3.22
EPCAM-201ENST00000263735 KIF15Q9NS87 1388 aa35.15■■■■□ 3.22
EPCAM-201ENST00000263735 ANKRD50Q9ULJ7 1429 aa35.14■■■■□ 3.22
EPCAM-201ENST00000263735 ZFYVE16Q7Z3T8 1539 aa35.14■■■■□ 3.22
EPCAM-201ENST00000263735 SCAPERQ9BY12 1400 aa35.14■■■■□ 3.22
EPCAM-201ENST00000263735 RTEL1-TNFRSF6BF6WH68 1400 aa35.12■■■■□ 3.21
EPCAM-201ENST00000263735 TSPOAP1O95153 1857 aa35.1■■■■□ 3.21
EPCAM-201ENST00000263735 PPRC1Q5VV67 1664 aaKnown RBP35.09■■■■□ 3.21
EPCAM-201ENST00000263735 DUOX2Q9NRD8 1548 aa35.08■■■■□ 3.21
EPCAM-201ENST00000263735 ZNF518AQ6AHZ1 1483 aa35.07■■■■□ 3.2
EPCAM-201ENST00000263735 ATP7AQ04656 1500 aa35.07■■■■□ 3.2
EPCAM-201ENST00000263735 KDM5CP41229 1560 aa35.05■■■■□ 3.2
EPCAM-201ENST00000263735 FAM69CQ0P6D2 419 aa35.03■■■■□ 3.2
EPCAM-201ENST00000263735 SPAG9O60271 1321 aaKnown RBP35.02■■■■□ 3.2
EPCAM-201ENST00000263735 KIDINS220Q9ULH0 1771 aa35.01■■■■□ 3.2
EPCAM-201ENST00000263735 TRIM52Q96A61 297 aa35.01■■■■□ 3.2
EPCAM-201ENST00000263735 POGZQ7Z3K3 1410 aa35.01■■■■□ 3.2
EPCAM-201ENST00000263735 AFAP1Q8N556 730 aa35.01■■■■□ 3.19
EPCAM-201ENST00000263735 RICTORQ6R327 1708 aa35■■■■□ 3.19
EPCAM-201ENST00000263735 KDM5DQ9BY66 1539 aa34.99■■■■□ 3.19
EPCAM-201ENST00000263735 UNC13BO14795 1591 aa34.98■■■■□ 3.19
EPCAM-201ENST00000263735 ERBINQ96RT1 1412 aa34.98■■■■□ 3.19
EPCAM-201ENST00000263735 HECW2Q9P2P5 1572 aa34.97■■■■□ 3.19
EPCAM-201ENST00000263735 DENND4BO75064 1496 aaPredicted RBP34.96■■■■□ 3.19
EPCAM-201ENST00000263735 TEX14Q8IWB6 1497 aa34.96■■■■□ 3.19
EPCAM-201ENST00000263735 PZPP20742 1482 aa34.92■■■■□ 3.18
EPCAM-201ENST00000263735 EIF2AK4Q9P2K8 1649 aaKnown RBP34.9■■■■□ 3.18
EPCAM-201ENST00000263735 MPHOSPH9Q99550 1183 aa34.89■■■■□ 3.18
EPCAM-201ENST00000263735 MLH3Q9UHC1 1453 aa34.89■■■■□ 3.18
EPCAM-201ENST00000263735 MAGI2Q86UL8 1455 aa34.85■■■■□ 3.17
EPCAM-201ENST00000263735 IQGAP3Q86VI3 1631 aa34.84■■■■□ 3.17
EPCAM-201ENST00000263735 DEPDC5O75140 1603 aa34.84■■■■□ 3.17
EPCAM-201ENST00000263735 FRMPD1Q5SYB0 1578 aa34.83■■■■□ 3.17
EPCAM-201ENST00000263735 ABCA6Q8N139 1617 aa34.81■■■■□ 3.16
EPCAM-201ENST00000263735 NUP155O75694 1391 aa34.8■■■■□ 3.16
EPCAM-201ENST00000263735 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
EPCAM-201ENST00000263735 DNAJC5Q9H3Z4 198 aa34.79■■■■□ 3.16
EPCAM-201ENST00000263735 FAM135AQ9P2D6 1515 aa34.79■■■■□ 3.16
EPCAM-201ENST00000263735 ZMYM4Q5VZL5 1548 aa34.78■■■■□ 3.16
EPCAM-201ENST00000263735 MYT1LQ9UL68 1186 aa34.76■■■■□ 3.16
EPCAM-201ENST00000263735 BCORL1Q5H9F3 1711 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms