RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 NEO1Q92859 1461 aa25.75■■□□□ 1.71
CHCHD3-201ENST00000262570 CFDP1Q9UEE9 299 aaPredicted RBP25.75■■□□□ 1.71
CHCHD3-201ENST00000262570 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
CHCHD3-201ENST00000262570 CDC42BPBQ9Y5S2 1711 aa25.75■■□□□ 1.71
CHCHD3-201ENST00000262570 ARHGAP5Q13017 1502 aa25.75■■□□□ 1.71
CHCHD3-201ENST00000262570 MYOM3Q5VTT5 1437 aa25.72■■□□□ 1.71
CHCHD3-201ENST00000262570 AKNAQ7Z591 1439 aa25.71■■□□□ 1.71
CHCHD3-201ENST00000262570 ITSN2Q9NZM3 1697 aa25.7■■□□□ 1.7
CHCHD3-201ENST00000262570 CFAP74Q9C0B2 1584 aa25.68■■□□□ 1.7
CHCHD3-201ENST00000262570 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
CHCHD3-201ENST00000262570 MIA2Q96PC5 1412 aa25.67■■□□□ 1.7
CHCHD3-201ENST00000262570 ZNF644Q9H582 1327 aaPredicted RBP25.64■■□□□ 1.69
CHCHD3-201ENST00000262570 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
CHCHD3-201ENST00000262570 COL17A1Q9UMD9 1497 aaPredicted RBP25.63■■□□□ 1.69
CHCHD3-201ENST00000262570 FGD6Q6ZV73 1430 aa25.62■■□□□ 1.69
CHCHD3-201ENST00000262570 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
CHCHD3-201ENST00000262570 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
CHCHD3-201ENST00000262570 KIAA1107Q9UPP5 1409 aa25.59■■□□□ 1.69
CHCHD3-201ENST00000262570 ABCC1P33527 1531 aa25.58■■□□□ 1.69
CHCHD3-201ENST00000262570 PLEKHH2Q8IVE3 1493 aa25.58■■□□□ 1.69
CHCHD3-201ENST00000262570 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
CHCHD3-201ENST00000262570 DENND4BO75064 1496 aaPredicted RBP25.58■■□□□ 1.68
CHCHD3-201ENST00000262570 KDM6BO15054 1643 aa25.57■■□□□ 1.68
CHCHD3-201ENST00000262570 CAMSAP2Q08AD1 1489 aa25.57■■□□□ 1.68
CHCHD3-201ENST00000262570 RAPGEF3O95398 923 aa25.56■■□□□ 1.68
CHCHD3-201ENST00000262570 HNRNPMP52272 730 aaKnown RBP eCLIP25.56■■□□□ 1.682e-6■■■■□ 23.8
CHCHD3-201ENST00000262570 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
CHCHD3-201ENST00000262570 TCOF1Q13428 1488 aaKnown RBP25.53■■□□□ 1.68
CHCHD3-201ENST00000262570 PTPN23Q9H3S7 1636 aa25.53■■□□□ 1.68
CHCHD3-201ENST00000262570 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
CHCHD3-201ENST00000262570 POGZQ7Z3K3 1410 aa25.52■■□□□ 1.68
CHCHD3-201ENST00000262570 TRAPPC8Q9Y2L5 1435 aa25.52■■□□□ 1.68
CHCHD3-201ENST00000262570 AFAP1Q8N556 730 aa25.52■■□□□ 1.68
CHCHD3-201ENST00000262570 ZNF518AQ6AHZ1 1483 aa25.49■■□□□ 1.67
CHCHD3-201ENST00000262570 RSPH4AQ5TD94 716 aa25.48■■□□□ 1.67
CHCHD3-201ENST00000262570 RRBP1Q9P2E9 1410 aaKnown RBP25.48■■□□□ 1.67
CHCHD3-201ENST00000262570 FRMPD1Q5SYB0 1578 aa25.48■■□□□ 1.67
CHCHD3-201ENST00000262570 RICTORQ6R327 1708 aa25.47■■□□□ 1.67
CHCHD3-201ENST00000262570 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
CHCHD3-201ENST00000262570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.45■■□□□ 1.66
CHCHD3-201ENST00000262570 ARHGEF5Q12774 1597 aa25.44■■□□□ 1.66
CHCHD3-201ENST00000262570 KDM5CP41229 1560 aa25.43■■□□□ 1.66
CHCHD3-201ENST00000262570 CCDC141Q6ZP82 1450 aa25.43■■□□□ 1.66
CHCHD3-201ENST00000262570 ZMYM4Q5VZL5 1548 aa25.41■■□□□ 1.66
CHCHD3-201ENST00000262570 MLH3Q9UHC1 1453 aa25.39■■□□□ 1.65
CHCHD3-201ENST00000262570 ABCC5O15440 1437 aa25.39■■□□□ 1.65
CHCHD3-201ENST00000262570 SPAG9O60271 1321 aaKnown RBP25.39■■□□□ 1.65
CHCHD3-201ENST00000262570 TSPY4P0CV99 314 aa25.39■■□□□ 1.65
CHCHD3-201ENST00000262570 TSPY10P0CW01 314 aa25.39■■□□□ 1.65
CHCHD3-201ENST00000262570 MAGI2Q86UL8 1455 aa25.38■■□□□ 1.65
CHCHD3-201ENST00000262570 DAPK1P53355 1430 aa25.37■■□□□ 1.65
CHCHD3-201ENST00000262570 DNMT1P26358 1616 aaKnown RBP25.36■■□□□ 1.65
CHCHD3-201ENST00000262570 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
CHCHD3-201ENST00000262570 HECW2Q9P2P5 1572 aa25.34■■□□□ 1.65
CHCHD3-201ENST00000262570 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
CHCHD3-201ENST00000262570 YEATS2Q9ULM3 1422 aa25.32■■□□□ 1.64
CHCHD3-201ENST00000262570 SHANK2Q9UPX8 1470 aa25.31■■□□□ 1.64
CHCHD3-201ENST00000262570 C9orf84Q5VXU9 1444 aa25.31■■□□□ 1.64
CHCHD3-201ENST00000262570 INO80Q9ULG1 1556 aaPredicted RBP25.3■■□□□ 1.64
CHCHD3-201ENST00000262570 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
CHCHD3-201ENST00000262570 ZFYVE16Q7Z3T8 1539 aa25.3■■□□□ 1.64
CHCHD3-201ENST00000262570 KIDINS220Q9ULH0 1771 aa25.29■■□□□ 1.64
CHCHD3-201ENST00000262570 MAST1Q9Y2H9 1570 aa25.29■■□□□ 1.64
CHCHD3-201ENST00000262570 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
CHCHD3-201ENST00000262570 ITGAEP38570 1179 aa25.27■■□□□ 1.64
CHCHD3-201ENST00000262570 CROCC2H7BZ55 1655 aa25.27■■□□□ 1.64
CHCHD3-201ENST00000262570 ARHGEF40Q8TER5 1519 aa25.27■■□□□ 1.64
CHCHD3-201ENST00000262570 CHIC2Q9UKJ5 165 aa25.27■■□□□ 1.64
CHCHD3-201ENST00000262570 ATP10AO60312 1499 aa25.24■■□□□ 1.63
CHCHD3-201ENST00000262570 DIP2CQ9Y2E4 1556 aa25.24■■□□□ 1.63
CHCHD3-201ENST00000262570 ABCA6Q8N139 1617 aa25.23■■□□□ 1.63
CHCHD3-201ENST00000262570 NCOA1Q15788 1441 aa25.21■■□□□ 1.63
CHCHD3-201ENST00000262570 ADGRL2O95490 1459 aa25.21■■□□□ 1.63
CHCHD3-201ENST00000262570 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.62
CHCHD3-201ENST00000262570 PLXNC1O60486 1568 aa25.18■■□□□ 1.62
CHCHD3-201ENST00000262570 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
CHCHD3-201ENST00000262570 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
CHCHD3-201ENST00000262570 A2MP01023 1474 aa25.16■■□□□ 1.62
CHCHD3-201ENST00000262570 DHX29Q7Z478 1369 aaKnown RBP25.16■■□□□ 1.62
CHCHD3-201ENST00000262570 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
CHCHD3-201ENST00000262570 REREQ9P2R6 1566 aa25.15■■□□□ 1.62
CHCHD3-201ENST00000262570 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.61
CHCHD3-201ENST00000262570 DUOX2Q9NRD8 1548 aa25.11■■□□□ 1.61
CHCHD3-201ENST00000262570 AGLP35573 1532 aa25.09■■□□□ 1.61
CHCHD3-201ENST00000262570 SIGLEC1Q9BZZ2 1709 aa25.09■■□□□ 1.61
CHCHD3-201ENST00000262570 TRIM26Q12899 539 aaPredicted RBP25.09■■□□□ 1.61
CHCHD3-201ENST00000262570 ARID4BQ4LE39 1312 aaPredicted RBP25.08■■□□□ 1.61
CHCHD3-201ENST00000262570 ERBINQ96RT1 1412 aa25.05■■□□□ 1.6
CHCHD3-201ENST00000262570 HFM1A2PYH4 1435 aa25.04■■□□□ 1.6
CHCHD3-201ENST00000262570 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
CHCHD3-201ENST00000262570 NAIPQ13075 1403 aa25.03■■□□□ 1.6
CHCHD3-201ENST00000262570 KIF3BO15066 747 aa25.03■■□□□ 1.6
CHCHD3-201ENST00000262570 MLECQ14165 292 aa24.99■■□□□ 1.59
CHCHD3-201ENST00000262570 EIF2AK4Q9P2K8 1649 aaKnown RBP24.98■■□□□ 1.59
CHCHD3-201ENST00000262570 BCORL1Q5H9F3 1711 aa24.97■■□□□ 1.59
CHCHD3-201ENST00000262570 GGT6Q6P531 493 aa24.97■■□□□ 1.59
CHCHD3-201ENST00000262570 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
CHCHD3-201ENST00000262570 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
CHCHD3-201ENST00000262570 SETD5Q9C0A6 1442 aa24.92■■□□□ 1.58
CHCHD3-201ENST00000262570 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms