RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 TRIM66O15016 1216 aa8.72□□□□□ -1.01
TCN1-201ENST00000257264 PDIA4P13667 645 aaKnown RBP8.72□□□□□ -1.01
TCN1-201ENST00000257264 PDE4DQ08499 809 aa8.72□□□□□ -1.01
TCN1-201ENST00000257264 APBB1O00213 710 aa8.71□□□□□ -1.02
TCN1-201ENST00000257264 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.02
TCN1-201ENST00000257264 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
TCN1-201ENST00000257264 PCDHB8Q9UN66 801 aa8.71□□□□□ -1.02
TCN1-201ENST00000257264 PCDHB13Q9Y5F0 798 aa8.71□□□□□ -1.02
TCN1-201ENST00000257264 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
TCN1-201ENST00000257264 FBXO22Q8NEZ5 403 aa8.7□□□□□ -1.02
TCN1-201ENST00000257264 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
TCN1-201ENST00000257264 NCKAP5LQ9HCH0 1330 aa8.7□□□□□ -1.02
TCN1-201ENST00000257264 SOX12O15370 315 aa8.69□□□□□ -1.02
TCN1-201ENST00000257264 FLIIQ13045 1269 aa8.69□□□□□ -1.02
TCN1-201ENST00000257264 MFSD10Q14728 455 aa8.69□□□□□ -1.02
TCN1-201ENST00000257264 POTEGQ6S5H5 508 aa8.69□□□□□ -1.02
TCN1-201ENST00000257264 ZRANB1Q9UGI0 708 aa8.69□□□□□ -1.02
TCN1-201ENST00000257264 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
TCN1-201ENST00000257264 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
TCN1-201ENST00000257264 ZNF579Q8NAF0 562 aaKnown RBP8.67□□□□□ -1.02
TCN1-201ENST00000257264 TSPYL2Q9H2G4 693 aaPredicted RBP8.67□□□□□ -1.02
TCN1-201ENST00000257264 DDX27Q96GQ7 796 aaKnown RBP8.66□□□□□ -1.02
TCN1-201ENST00000257264 ZNF316A6NFI3 1004 aaPredicted RBP8.65□□□□□ -1.02
TCN1-201ENST00000257264 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
TCN1-201ENST00000257264 CAMK2BQ13554 666 aa8.65□□□□□ -1.03
TCN1-201ENST00000257264 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.03
TCN1-201ENST00000257264 MLLT3P42568 568 aaPredicted RBP8.64□□□□□ -1.03
TCN1-201ENST00000257264 FAM117AQ9C073 453 aa8.64□□□□□ -1.03
TCN1-201ENST00000257264 DDRGK1Q96HY6 314 aa8.63□□□□□ -1.03
TCN1-201ENST00000257264 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
TCN1-201ENST00000257264 CABP2Q9NPB3 220 aa8.61□□□□□ -1.03
TCN1-201ENST00000257264 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
TCN1-201ENST00000257264 PLEKHG3A1L390 1219 aa8.58□□□□□ -1.04
TCN1-201ENST00000257264 A6NJR5 290 aa8.57□□□□□ -1.04
TCN1-201ENST00000257264 GALR2O43603 387 aaPredicted RBP8.57□□□□□ -1.04
TCN1-201ENST00000257264 NECTIN2Q92692 538 aa8.56□□□□□ -1.04
TCN1-201ENST00000257264 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
TCN1-201ENST00000257264 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
TCN1-201ENST00000257264 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
TCN1-201ENST00000257264 TRAK2O60296 914 aa8.55□□□□□ -1.04
TCN1-201ENST00000257264 GOPCQ9HD26 462 aa8.55□□□□□ -1.04
TCN1-201ENST00000257264 CCDC61Q9Y6R9 512 aa8.55□□□□□ -1.04
TCN1-201ENST00000257264 MAMSTRQ6ZN01 415 aa8.54□□□□□ -1.04
TCN1-201ENST00000257264 SPDYE16A6NNV3 312 aaPredicted RBP8.53□□□□□ -1.04
TCN1-201ENST00000257264 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.04
TCN1-201ENST00000257264 IFNL1Q8IU54 200 aa8.52□□□□□ -1.05
TCN1-201ENST00000257264 AMHR2Q16671 573 aa8.51□□□□□ -1.05
TCN1-201ENST00000257264 GPR37O15354 613 aa8.5□□□□□ -1.05
TCN1-201ENST00000257264 MAP2K5Q13163 448 aa8.5□□□□□ -1.05
TCN1-201ENST00000257264 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
TCN1-201ENST00000257264 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
TCN1-201ENST00000257264 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
TCN1-201ENST00000257264 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
TCN1-201ENST00000257264 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
TCN1-201ENST00000257264 DPYSL4O14531 572 aa8.48□□□□□ -1.05
TCN1-201ENST00000257264 IRF6O14896 467 aa8.48□□□□□ -1.05
TCN1-201ENST00000257264 PDIA6Q15084 440 aa8.48□□□□□ -1.05
TCN1-201ENST00000257264 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
TCN1-201ENST00000257264 FAM163AQ96GL9 167 aaPredicted RBP8.48□□□□□ -1.05
TCN1-201ENST00000257264 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
TCN1-201ENST00000257264 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
TCN1-201ENST00000257264 C7P10643 843 aa8.46□□□□□ -1.06
TCN1-201ENST00000257264 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
TCN1-201ENST00000257264 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
TCN1-201ENST00000257264 GPHNQ9NQX3 736 aaPredicted RBP8.45□□□□□ -1.06
TCN1-201ENST00000257264 SCUBE2Q9NQ36 999 aa8.44□□□□□ -1.06
TCN1-201ENST00000257264 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
TCN1-201ENST00000257264 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
TCN1-201ENST00000257264 MAP3K13O43283 966 aa8.44□□□□□ -1.06
TCN1-201ENST00000257264 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
TCN1-201ENST00000257264 TTLL12Q14166 644 aaPredicted RBP8.43□□□□□ -1.06
TCN1-201ENST00000257264 PELP1Q8IZL8 1130 aaKnown RBP8.43□□□□□ -1.06
TCN1-201ENST00000257264 CCDC97Q96F63 343 aaPredicted RBP8.43□□□□□ -1.06
TCN1-201ENST00000257264 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
TCN1-201ENST00000257264 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
TCN1-201ENST00000257264 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
TCN1-201ENST00000257264 MCM6Q14566 821 aa8.42□□□□□ -1.06
TCN1-201ENST00000257264 KIF12Q96FN5 646 aa8.42□□□□□ -1.06
TCN1-201ENST00000257264 GNPATO15228 680 aa8.41□□□□□ -1.06
TCN1-201ENST00000257264 RAD21O60216 631 aa8.41□□□□□ -1.06
TCN1-201ENST00000257264 PROSER2Q86WR7 435 aaPredicted RBP8.41□□□□□ -1.06
TCN1-201ENST00000257264 AEBP1Q8IUX7 1158 aa8.39□□□□□ -1.07
TCN1-201ENST00000257264 HIC1Q14526 733 aa8.39□□□□□ -1.07
TCN1-201ENST00000257264 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
TCN1-201ENST00000257264 GRXCR2A6NFK2 248 aa8.37□□□□□ -1.07
TCN1-201ENST00000257264 FCHSD2O94868 740 aa8.37□□□□□ -1.07
TCN1-201ENST00000257264 SH3D19Q5HYK7 790 aa8.36□□□□□ -1.07
TCN1-201ENST00000257264 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
TCN1-201ENST00000257264 ATMINO43313 823 aaPredicted RBP8.35□□□□□ -1.07
TCN1-201ENST00000257264 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
TCN1-201ENST00000257264 MS4A1P11836 297 aa8.35□□□□□ -1.07
TCN1-201ENST00000257264 DSG2Q14126 1118 aa8.35□□□□□ -1.07
TCN1-201ENST00000257264 TMCO4Q5TGY1 634 aa8.35□□□□□ -1.07
TCN1-201ENST00000257264 RGS22Q8NE09 1264 aa8.34□□□□□ -1.07
TCN1-201ENST00000257264 FECHP22830 423 aa8.33□□□□□ -1.08
TCN1-201ENST00000257264 POTEJP0CG39 1038 aa8.32□□□□□ -1.08
TCN1-201ENST00000257264 OSBPP22059 807 aa8.31□□□□□ -1.08
TCN1-201ENST00000257264 SKIV2LQ15477 1246 aaKnown RBP8.31□□□□□ -1.08
TCN1-201ENST00000257264 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
TCN1-201ENST00000257264 MS4A3Q96HJ5 214 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms