RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
PDE6A-201ENST00000255266 PKD2Q13563 968 aa12.33□□□□□ -0.44
PDE6A-201ENST00000255266 GRIN2AQ12879 1464 aa12.33□□□□□ -0.44
PDE6A-201ENST00000255266 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.44
PDE6A-201ENST00000255266 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
PDE6A-201ENST00000255266 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
PDE6A-201ENST00000255266 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
PDE6A-201ENST00000255266 TMF1P82094 1093 aa12.32□□□□□ -0.44
PDE6A-201ENST00000255266 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
PDE6A-201ENST00000255266 HDGFL2Q7Z4V5 671 aaPredicted RBP12.31□□□□□ -0.44
PDE6A-201ENST00000255266 NUDCQ9Y266 331 aa12.31□□□□□ -0.44
PDE6A-201ENST00000255266 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
PDE6A-201ENST00000255266 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
PDE6A-201ENST00000255266 DCAF11Q8TEB1 546 aa12.31□□□□□ -0.44
PDE6A-201ENST00000255266 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
PDE6A-201ENST00000255266 RUSC2Q8N2Y8 1516 aa12.29□□□□□ -0.44
PDE6A-201ENST00000255266 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
PDE6A-201ENST00000255266 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
PDE6A-201ENST00000255266 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
PDE6A-201ENST00000255266 STK26Q9P289 416 aa12.24□□□□□ -0.45
PDE6A-201ENST00000255266 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
PDE6A-201ENST00000255266 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
PDE6A-201ENST00000255266 MAPK8IP3Q9UPT6 1336 aa12.23□□□□□ -0.45
PDE6A-201ENST00000255266 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
PDE6A-201ENST00000255266 PLB1Q6P1J6 1458 aa12.23□□□□□ -0.45
PDE6A-201ENST00000255266 TEX14Q8IWB6 1497 aa12.22□□□□□ -0.45
PDE6A-201ENST00000255266 WDR62O43379 1518 aa12.22□□□□□ -0.45
PDE6A-201ENST00000255266 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
PDE6A-201ENST00000255266 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
PDE6A-201ENST00000255266 WDR97A6NE52 1622 aa12.21□□□□□ -0.45
PDE6A-201ENST00000255266 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.46
PDE6A-201ENST00000255266 TROQ12816 1431 aaPredicted RBP12.2□□□□□ -0.46
PDE6A-201ENST00000255266 NPHP1O15259 732 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
PDE6A-201ENST00000255266 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 CCDC9Q9Y3X0 531 aaKnown RBP12.19□□□□□ -0.46
PDE6A-201ENST00000255266 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 PRXQ9BXM0 1461 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 ROCK2O75116 1388 aaKnown RBP12.19□□□□□ -0.46
PDE6A-201ENST00000255266 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
PDE6A-201ENST00000255266 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
PDE6A-201ENST00000255266 TERF2IPQ9NYB0 399 aa12.18□□□□□ -0.46
PDE6A-201ENST00000255266 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
PDE6A-201ENST00000255266 ZNF608Q9ULD9 1512 aaPredicted RBP12.17□□□□□ -0.46
PDE6A-201ENST00000255266 MYH16Q9H6N6 1097 aa12.17□□□□□ -0.46
PDE6A-201ENST00000255266 KIF15Q9NS87 1388 aa12.17□□□□□ -0.46
PDE6A-201ENST00000255266 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
PDE6A-201ENST00000255266 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
PDE6A-201ENST00000255266 ATF3P18847 181 aa12.15□□□□□ -0.46
PDE6A-201ENST00000255266 KIF14Q15058 1648 aa12.15□□□□□ -0.46
PDE6A-201ENST00000255266 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
PDE6A-201ENST00000255266 NCOA2Q15596 1464 aa12.15□□□□□ -0.46
PDE6A-201ENST00000255266 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
PDE6A-201ENST00000255266 ARXQ96QS3 562 aa12.14□□□□□ -0.47
PDE6A-201ENST00000255266 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
PDE6A-201ENST00000255266 AKNAQ7Z591 1439 aa12.14□□□□□ -0.47
PDE6A-201ENST00000255266 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
PDE6A-201ENST00000255266 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
PDE6A-201ENST00000255266 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
PDE6A-201ENST00000255266 SCAPERQ9BY12 1400 aa12.13□□□□□ -0.47
PDE6A-201ENST00000255266 RAB3GAP2Q9H2M9 1393 aa12.13□□□□□ -0.47
PDE6A-201ENST00000255266 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
PDE6A-201ENST00000255266 MIA2Q96PC5 1412 aa12.12□□□□□ -0.47
PDE6A-201ENST00000255266 FOXD1Q16676 465 aa12.12□□□□□ -0.47
PDE6A-201ENST00000255266 DMRT2Q9Y5R5 561 aa12.12□□□□□ -0.47
PDE6A-201ENST00000255266 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
PDE6A-201ENST00000255266 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
PDE6A-201ENST00000255266 PPP6R1Q9UPN7 881 aa12.1□□□□□ -0.47
PDE6A-201ENST00000255266 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
PDE6A-201ENST00000255266 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
PDE6A-201ENST00000255266 SIN3AQ96ST3 1273 aa12.09□□□□□ -0.47
PDE6A-201ENST00000255266 ANKLE2Q86XL3 938 aa12.08□□□□□ -0.48
PDE6A-201ENST00000255266 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
PDE6A-201ENST00000255266 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.48
PDE6A-201ENST00000255266 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
PDE6A-201ENST00000255266 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
PDE6A-201ENST00000255266 ANKRD50Q9ULJ7 1429 aa12.08□□□□□ -0.48
PDE6A-201ENST00000255266 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
PDE6A-201ENST00000255266 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDE6A-201ENST00000255266 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
PDE6A-201ENST00000255266 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
PDE6A-201ENST00000255266 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
PDE6A-201ENST00000255266 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
PDE6A-201ENST00000255266 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
PDE6A-201ENST00000255266 CALD1Q05682 793 aaKnown RBP12.06□□□□□ -0.48
PDE6A-201ENST00000255266 AFAP1Q8N556 730 aa12.06□□□□□ -0.48
PDE6A-201ENST00000255266 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
PDE6A-201ENST00000255266 EVA1CP58658 441 aa12.06□□□□□ -0.48
PDE6A-201ENST00000255266 C9orf84Q5VXU9 1444 aa12.06□□□□□ -0.48
PDE6A-201ENST00000255266 SOX12O15370 315 aa12.05□□□□□ -0.48
PDE6A-201ENST00000255266 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
PDE6A-201ENST00000255266 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
PDE6A-201ENST00000255266 PSME1Q06323 249 aa12.04□□□□□ -0.48
PDE6A-201ENST00000255266 MS4A1P11836 297 aa12.03□□□□□ -0.48
PDE6A-201ENST00000255266 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.48
PDE6A-201ENST00000255266 PROSER2Q86WR7 435 aaPredicted RBP12.02□□□□□ -0.48
PDE6A-201ENST00000255266 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.49
PDE6A-201ENST00000255266 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
PDE6A-201ENST00000255266 AMPHP49418 695 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms