RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
LSM8-201ENST00000249299 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
LSM8-201ENST00000249299 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
LSM8-201ENST00000249299 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
LSM8-201ENST00000249299 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
LSM8-201ENST00000249299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.67■□□□□ 0.74
LSM8-201ENST00000249299 TCOF1Q13428 1488 aaKnown RBP19.66■□□□□ 0.74
LSM8-201ENST00000249299 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
LSM8-201ENST00000249299 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
LSM8-201ENST00000249299 KCNH8Q96L42 1107 aa19.66■□□□□ 0.74
LSM8-201ENST00000249299 CFDP1Q9UEE9 299 aaPredicted RBP19.66■□□□□ 0.74
LSM8-201ENST00000249299 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.74
LSM8-201ENST00000249299 PLCH2O75038 1416 aa19.64■□□□□ 0.73
LSM8-201ENST00000249299 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
LSM8-201ENST00000249299 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
LSM8-201ENST00000249299 GLI2P10070 1586 aa19.6■□□□□ 0.73
LSM8-201ENST00000249299 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.73
LSM8-201ENST00000249299 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.73
LSM8-201ENST00000249299 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.73
LSM8-201ENST00000249299 EFCAB2Q5VUJ9 269 aa19.58■□□□□ 0.73
LSM8-201ENST00000249299 PLEKHH2Q8IVE3 1493 aa19.58■□□□□ 0.73
LSM8-201ENST00000249299 PREX2Q70Z35 1606 aa19.58■□□□□ 0.72
LSM8-201ENST00000249299 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
LSM8-201ENST00000249299 KIAA1107Q9UPP5 1409 aa19.56■□□□□ 0.72
LSM8-201ENST00000249299 CDC42BPAQ5VT25 1732 aa19.56■□□□□ 0.72
LSM8-201ENST00000249299 CD109Q6YHK3 1445 aa19.54■□□□□ 0.72
LSM8-201ENST00000249299 MYO5CQ9NQX4 1742 aa19.54■□□□□ 0.72
LSM8-201ENST00000249299 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
LSM8-201ENST00000249299 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
LSM8-201ENST00000249299 CDC42BPBQ9Y5S2 1711 aa19.5■□□□□ 0.71
LSM8-201ENST00000249299 DIP2BQ9P265 1576 aa19.49■□□□□ 0.71
LSM8-201ENST00000249299 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
LSM8-201ENST00000249299 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
LSM8-201ENST00000249299 FANCAO15360 1455 aa19.48■□□□□ 0.71
LSM8-201ENST00000249299 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
LSM8-201ENST00000249299 NEO1Q92859 1461 aa19.47■□□□□ 0.71
LSM8-201ENST00000249299 ARHGEF5Q12774 1597 aa19.47■□□□□ 0.71
LSM8-201ENST00000249299 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
LSM8-201ENST00000249299 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
LSM8-201ENST00000249299 DAPK1P53355 1430 aa19.46■□□□□ 0.71
LSM8-201ENST00000249299 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.71
LSM8-201ENST00000249299 ROCK1Q13464 1354 aa19.45■□□□□ 0.7
LSM8-201ENST00000249299 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
LSM8-201ENST00000249299 ABCC5O15440 1437 aa19.45■□□□□ 0.7
LSM8-201ENST00000249299 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
LSM8-201ENST00000249299 DNMT1P26358 1616 aaKnown RBP19.44■□□□□ 0.7
LSM8-201ENST00000249299 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
LSM8-201ENST00000249299 HRCP23327 699 aa19.43■□□□□ 0.7
LSM8-201ENST00000249299 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
LSM8-201ENST00000249299 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
LSM8-201ENST00000249299 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
LSM8-201ENST00000249299 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
LSM8-201ENST00000249299 TEX14Q8IWB6 1497 aa19.41■□□□□ 0.7
LSM8-201ENST00000249299 ABCC1P33527 1531 aa19.41■□□□□ 0.7
LSM8-201ENST00000249299 PTPRKQ15262 1439 aa19.41■□□□□ 0.7
LSM8-201ENST00000249299 HNRNPMP52272 730 aaKnown RBP eCLIP19.39■□□□□ 0.692e-7■□□□□ 11
LSM8-201ENST00000249299 HFM1A2PYH4 1435 aa19.39■□□□□ 0.69
LSM8-201ENST00000249299 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
LSM8-201ENST00000249299 ADGRL1O94910 1474 aa19.38■□□□□ 0.69
LSM8-201ENST00000249299 ITGAEP38570 1179 aa19.38■□□□□ 0.69
LSM8-201ENST00000249299 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
LSM8-201ENST00000249299 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
LSM8-201ENST00000249299 RTEL1-TNFRSF6BF6WH68 1400 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 SCAPERQ9BY12 1400 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 NCOA1Q15788 1441 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 SETD5Q9C0A6 1442 aa19.35■□□□□ 0.69
LSM8-201ENST00000249299 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
LSM8-201ENST00000249299 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.69
LSM8-201ENST00000249299 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
LSM8-201ENST00000249299 NAIPQ13075 1403 aa19.31■□□□□ 0.68
LSM8-201ENST00000249299 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
LSM8-201ENST00000249299 DENND4BO75064 1496 aaPredicted RBP19.31■□□□□ 0.68
LSM8-201ENST00000249299 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
LSM8-201ENST00000249299 KIF13AQ9H1H9 1805 aa19.3■□□□□ 0.68
LSM8-201ENST00000249299 SPAG9O60271 1321 aaKnown RBP19.29■□□□□ 0.68
LSM8-201ENST00000249299 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
LSM8-201ENST00000249299 AFAP1Q8N556 730 aa19.26■□□□□ 0.67
LSM8-201ENST00000249299 MLH3Q9UHC1 1453 aa19.26■□□□□ 0.67
LSM8-201ENST00000249299 PPRC1Q5VV67 1664 aaKnown RBP19.26■□□□□ 0.67
LSM8-201ENST00000249299 KDM5CP41229 1560 aa19.26■□□□□ 0.67
LSM8-201ENST00000249299 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
LSM8-201ENST00000249299 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
LSM8-201ENST00000249299 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
LSM8-201ENST00000249299 KIF15Q9NS87 1388 aa19.24■□□□□ 0.67
LSM8-201ENST00000249299 RRP7BPQ9NSQ0 103 aa19.24■□□□□ 0.67
LSM8-201ENST00000249299 GCC2Q8IWJ2 1684 aa19.22■□□□□ 0.67
LSM8-201ENST00000249299 TRHP20396 242 aaPredicted RBP19.22■□□□□ 0.67
LSM8-201ENST00000249299 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
LSM8-201ENST00000249299 MAGI2Q86UL8 1455 aa19.21■□□□□ 0.67
LSM8-201ENST00000249299 ZFYVE16Q7Z3T8 1539 aa19.21■□□□□ 0.67
LSM8-201ENST00000249299 ANKRD50Q9ULJ7 1429 aa19.21■□□□□ 0.67
LSM8-201ENST00000249299 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
LSM8-201ENST00000249299 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
LSM8-201ENST00000249299 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
LSM8-201ENST00000249299 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
LSM8-201ENST00000249299 ZMYM4Q5VZL5 1548 aa19.18■□□□□ 0.66
LSM8-201ENST00000249299 RAPGEF3O95398 923 aa19.16■□□□□ 0.66
LSM8-201ENST00000249299 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms