RNA–Protein interactions for RNA: ENST00000248451.7

PNKD-201, Transcript of PNKD, MBL domain containing, humanhuman

TSL 1 (best) BASIC

Gene PNKD, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-201ENST00000248451 MADDQ8WXG6 1647 aa26.15■■□□□ 1.78
PNKD-201ENST00000248451 PTPRMP28827 1452 aa26.15■■□□□ 1.78
PNKD-201ENST00000248451 SCAPERQ9BY12 1400 aa26.14■■□□□ 1.77
PNKD-201ENST00000248451 YEATS2Q9ULM3 1422 aa26.14■■□□□ 1.77
PNKD-201ENST00000248451 CLIP1P30622 1438 aa26.13■■□□□ 1.77
PNKD-201ENST00000248451 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
PNKD-201ENST00000248451 MAGI2Q86UL8 1455 aa26.12■■□□□ 1.77
PNKD-201ENST00000248451 FYCO1Q9BQS8 1478 aa26.1■■□□□ 1.77
PNKD-201ENST00000248451 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.77
PNKD-201ENST00000248451 EFCAB2Q5VUJ9 269 aa26.07■■□□□ 1.76
PNKD-201ENST00000248451 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
PNKD-201ENST00000248451 PREX2Q70Z35 1606 aa26.06■■□□□ 1.76
PNKD-201ENST00000248451 ARID4BQ4LE39 1312 aaPredicted RBP26.06■■□□□ 1.76
PNKD-201ENST00000248451 RIMS1Q86UR5 1692 aaKnown RBP26.05■■□□□ 1.76
PNKD-201ENST00000248451 KDM5CP41229 1560 aa26.03■■□□□ 1.76
PNKD-201ENST00000248451 ZNF518AQ6AHZ1 1483 aa26■■□□□ 1.75
PNKD-201ENST00000248451 CDC42BPAQ5VT25 1732 aa26■■□□□ 1.75
PNKD-201ENST00000248451 ABCC1P33527 1531 aa25.98■■□□□ 1.75
PNKD-201ENST00000248451 ATP10AO60312 1499 aa25.97■■□□□ 1.75
PNKD-201ENST00000248451 C9orf84Q5VXU9 1444 aa25.96■■□□□ 1.75
PNKD-201ENST00000248451 ITSN2Q9NZM3 1697 aa25.95■■□□□ 1.74
PNKD-201ENST00000248451 FER1L4A9Z1Z3 1794 aa25.95■■□□□ 1.74
PNKD-201ENST00000248451 ARHGEF12Q9NZN5 1544 aa25.94■■□□□ 1.74
PNKD-201ENST00000248451 DIP2CQ9Y2E4 1556 aa25.93■■□□□ 1.74
PNKD-201ENST00000248451 AFAP1Q8N556 730 aa25.92■■□□□ 1.74
PNKD-201ENST00000248451 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
PNKD-201ENST00000248451 ABCA6Q8N139 1617 aa25.9■■□□□ 1.74
PNKD-201ENST00000248451 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
PNKD-201ENST00000248451 REREQ9P2R6 1566 aa25.89■■□□□ 1.73
PNKD-201ENST00000248451 MLH3Q9UHC1 1453 aa25.88■■□□□ 1.73
PNKD-201ENST00000248451 SAMD9LQ8IVG5 1584 aa25.86■■□□□ 1.73
PNKD-201ENST00000248451 GPATCH8Q9UKJ3 1502 aaKnown RBP25.85■■□□□ 1.73
PNKD-201ENST00000248451 MLECQ14165 292 aa25.85■■□□□ 1.73
PNKD-201ENST00000248451 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
PNKD-201ENST00000248451 KIDINS220Q9ULH0 1771 aa25.83■■□□□ 1.73
PNKD-201ENST00000248451 SYCP2Q9BX26 1530 aa25.8■■□□□ 1.72
PNKD-201ENST00000248451 ILDR1Q86SU0 546 aaPredicted RBP25.78■■□□□ 1.72
PNKD-201ENST00000248451 AGLP35573 1532 aa25.78■■□□□ 1.72
PNKD-201ENST00000248451 EHBP1L1Q8N3D4 1523 aa25.76■■□□□ 1.71
PNKD-201ENST00000248451 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
PNKD-201ENST00000248451 TIAM1Q13009 1591 aa25.74■■□□□ 1.71
PNKD-201ENST00000248451 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
PNKD-201ENST00000248451 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
PNKD-201ENST00000248451 KIAA1107Q9UPP5 1409 aa25.71■■□□□ 1.71
PNKD-201ENST00000248451 CCNB3Q8WWL7 1395 aa25.71■■□□□ 1.71
PNKD-201ENST00000248451 ZNF777Q9ULD5 760 aaPredicted RBP25.71■■□□□ 1.71
PNKD-201ENST00000248451 INO80Q9ULG1 1556 aaPredicted RBP25.7■■□□□ 1.71
PNKD-201ENST00000248451 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
PNKD-201ENST00000248451 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
PNKD-201ENST00000248451 HSPA2P54652 639 aa25.67■■□□□ 1.7
PNKD-201ENST00000248451 CFDP1Q9UEE9 299 aaPredicted RBP25.67■■□□□ 1.7
PNKD-201ENST00000248451 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
PNKD-201ENST00000248451 HNRNPMP52272 730 aaKnown RBP eCLIP25.66■■□□□ 1.7
PNKD-201ENST00000248451 C3P01024 1663 aa25.66■■□□□ 1.7
PNKD-201ENST00000248451 CEBPAP49715 358 aaPredicted RBP25.65■■□□□ 1.7
PNKD-201ENST00000248451 PLXNC1O60486 1568 aa25.64■■□□□ 1.69
PNKD-201ENST00000248451 SPAG9O60271 1321 aaKnown RBP25.63■■□□□ 1.69
PNKD-201ENST00000248451 MBD5Q9P267 1494 aa25.6■■□□□ 1.69
PNKD-201ENST00000248451 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
PNKD-201ENST00000248451 SETD1BQ9UPS6 1966 aaKnown RBP25.59■■□□□ 1.69
PNKD-201ENST00000248451 ZNF644Q9H582 1327 aaPredicted RBP25.59■■□□□ 1.69
PNKD-201ENST00000248451 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
PNKD-201ENST00000248451 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
PNKD-201ENST00000248451 VPS8Q8N3P4 1428 aa25.57■■□□□ 1.68
PNKD-201ENST00000248451 MROH2AA6NES4 1674 aa25.56■■□□□ 1.68
PNKD-201ENST00000248451 CNTLNQ9NXG0 1405 aa25.55■■□□□ 1.68
PNKD-201ENST00000248451 A2MP01023 1474 aa25.55■■□□□ 1.68
PNKD-201ENST00000248451 ADGBQ8N7X0 1667 aa25.55■■□□□ 1.68
PNKD-201ENST00000248451 UHRF1BP1Q6BDS2 1440 aa25.54■■□□□ 1.68
PNKD-201ENST00000248451 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
PNKD-201ENST00000248451 CAMSAP2Q08AD1 1489 aa25.51■■□□□ 1.67
PNKD-201ENST00000248451 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
PNKD-201ENST00000248451 LRRC9Q6ZRR7 1453 aa25.48■■□□□ 1.67
PNKD-201ENST00000248451 RTEL1-TNFRSF6BF6WH68 1400 aa25.48■■□□□ 1.67
PNKD-201ENST00000248451 ESF1Q9H501 851 aaKnown RBP25.47■■□□□ 1.67
PNKD-201ENST00000248451 FBXO41Q8TF61 875 aa25.46■■□□□ 1.67
PNKD-201ENST00000248451 CCDC141Q6ZP82 1450 aa25.46■■□□□ 1.67
PNKD-201ENST00000248451 MAP3K1Q13233 1512 aa25.45■■□□□ 1.66
PNKD-201ENST00000248451 NPATQ14207 1427 aa25.44■■□□□ 1.66
PNKD-201ENST00000248451 ARHGEF5Q12774 1597 aa25.43■■□□□ 1.66
PNKD-201ENST00000248451 ZMYM3Q14202 1370 aa25.42■■□□□ 1.66
PNKD-201ENST00000248451 DHX29Q7Z478 1369 aaKnown RBP25.38■■□□□ 1.65
PNKD-201ENST00000248451 KANK4Q5T7N3 995 aaPredicted RBP25.36■■□□□ 1.65
PNKD-201ENST00000248451 MYO3AQ8NEV4 1616 aa25.36■■□□□ 1.65
PNKD-201ENST00000248451 PTPRKQ15262 1439 aa25.36■■□□□ 1.65
PNKD-201ENST00000248451 ZNF142P52746 1687 aaPredicted RBP25.36■■□□□ 1.65
PNKD-201ENST00000248451 GGT6Q6P531 493 aa25.35■■□□□ 1.65
PNKD-201ENST00000248451 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
PNKD-201ENST00000248451 RSPH4AQ5TD94 716 aa25.33■■□□□ 1.65
PNKD-201ENST00000248451 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
PNKD-201ENST00000248451 MAST1Q9Y2H9 1570 aa25.31■■□□□ 1.64
PNKD-201ENST00000248451 PTPRTO14522 1441 aa25.31■■□□□ 1.64
PNKD-201ENST00000248451 MYOM3Q5VTT5 1437 aa25.3■■□□□ 1.64
PNKD-201ENST00000248451 CAMSAP1Q5T5Y3 1602 aa25.3■■□□□ 1.64
PNKD-201ENST00000248451 FAM135AQ9P2D6 1515 aa25.29■■□□□ 1.64
PNKD-201ENST00000248451 CERKQ8TCT0 537 aa25.29■■□□□ 1.64
PNKD-201ENST00000248451 DMRT2Q9Y5R5 561 aa25.29■■□□□ 1.64
PNKD-201ENST00000248451 CEP170BQ9Y4F5 1589 aaPredicted RBP25.28■■□□□ 1.64
PNKD-201ENST00000248451 MIA2Q96PC5 1412 aa25.28■■□□□ 1.64
PNKD-201ENST00000248451 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms