RNA–Protein interactions for RNA: ENST00000229332.11

CLEC4A-201, Transcript of C-type lectin domain family 4 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLEC4A, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4A-201ENST00000229332 PPP1R37O75864 691 aa13.33□□□□□ -0.28
CLEC4A-201ENST00000229332 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
CLEC4A-201ENST00000229332 HOXB3P14651 431 aaPredicted RBP13.31□□□□□ -0.28
CLEC4A-201ENST00000229332 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
CLEC4A-201ENST00000229332 EMP3P54852 163 aa13.27□□□□□ -0.29
CLEC4A-201ENST00000229332 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
CLEC4A-201ENST00000229332 C2orf72A6NCS6 295 aa13.26□□□□□ -0.29
CLEC4A-201ENST00000229332 MARVELD3Q96A59 401 aa13.26□□□□□ -0.29
CLEC4A-201ENST00000229332 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
CLEC4A-201ENST00000229332 KIF3CO14782 793 aa13.25□□□□□ -0.29
CLEC4A-201ENST00000229332 HOXB1P14653 301 aaPredicted RBP13.23□□□□□ -0.29
CLEC4A-201ENST00000229332 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
CLEC4A-201ENST00000229332 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
CLEC4A-201ENST00000229332 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
CLEC4A-201ENST00000229332 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
CLEC4A-201ENST00000229332 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
CLEC4A-201ENST00000229332 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
CLEC4A-201ENST00000229332 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
CLEC4A-201ENST00000229332 ERBB3P21860 1342 aa13.13□□□□□ -0.31
CLEC4A-201ENST00000229332 FOXK1P85037 733 aa13.12□□□□□ -0.31
CLEC4A-201ENST00000229332 SLC34A2O95436 690 aa13.11□□□□□ -0.31
CLEC4A-201ENST00000229332 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
CLEC4A-201ENST00000229332 ARSIQ5FYB1 569 aa13.09□□□□□ -0.31
CLEC4A-201ENST00000229332 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
CLEC4A-201ENST00000229332 PDE4AP27815 886 aa13.07□□□□□ -0.32
CLEC4A-201ENST00000229332 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
CLEC4A-201ENST00000229332 DSG2Q14126 1118 aa13.05□□□□□ -0.32
CLEC4A-201ENST00000229332 CRISPLD2Q9H0B8 497 aa13.05□□□□□ -0.32
CLEC4A-201ENST00000229332 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
CLEC4A-201ENST00000229332 VARS2Q5ST30 1063 aaKnown RBP13.03□□□□□ -0.32
CLEC4A-201ENST00000229332 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
CLEC4A-201ENST00000229332 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
CLEC4A-201ENST00000229332 TBC1D12O60347 775 aa13□□□□□ -0.33
CLEC4A-201ENST00000229332 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
CLEC4A-201ENST00000229332 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
CLEC4A-201ENST00000229332 PTCD2Q8WV60 388 aaKnown RBP13□□□□□ -0.33
CLEC4A-201ENST00000229332 KHSRPQ92945 711 aaKnown RBP eCLIP13□□□□□ -0.33
CLEC4A-201ENST00000229332 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
CLEC4A-201ENST00000229332 NUDT7P0C024 238 aa12.99□□□□□ -0.33
CLEC4A-201ENST00000229332 NCKAP5LQ9HCH0 1330 aa12.98□□□□□ -0.33
CLEC4A-201ENST00000229332 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
CLEC4A-201ENST00000229332 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
CLEC4A-201ENST00000229332 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
CLEC4A-201ENST00000229332 PSDA5PKW4 1024 aaPredicted RBP12.92□□□□□ -0.34
CLEC4A-201ENST00000229332 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
CLEC4A-201ENST00000229332 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
CLEC4A-201ENST00000229332 MFSD10Q14728 455 aa12.91□□□□□ -0.34
CLEC4A-201ENST00000229332 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
CLEC4A-201ENST00000229332 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
CLEC4A-201ENST00000229332 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
CLEC4A-201ENST00000229332 OXER1Q8TDS5 423 aa12.88□□□□□ -0.35
CLEC4A-201ENST00000229332 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLEC4A-201ENST00000229332 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
CLEC4A-201ENST00000229332 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
CLEC4A-201ENST00000229332 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
CLEC4A-201ENST00000229332 PBX2P40425 430 aa12.82□□□□□ -0.36
CLEC4A-201ENST00000229332 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
CLEC4A-201ENST00000229332 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
CLEC4A-201ENST00000229332 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
CLEC4A-201ENST00000229332 EVI5O60447 810 aa12.74□□□□□ -0.37
CLEC4A-201ENST00000229332 PTGER2P43116 358 aa12.73□□□□□ -0.37
CLEC4A-201ENST00000229332 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLEC4A-201ENST00000229332 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
CLEC4A-201ENST00000229332 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
CLEC4A-201ENST00000229332 ARHGAP33O14559 1287 aa12.72□□□□□ -0.37
CLEC4A-201ENST00000229332 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
CLEC4A-201ENST00000229332 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
CLEC4A-201ENST00000229332 ANO8Q9HCE9 1232 aaPredicted RBP12.71□□□□□ -0.37
CLEC4A-201ENST00000229332 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
CLEC4A-201ENST00000229332 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
CLEC4A-201ENST00000229332 AXIN2Q9Y2T1 843 aa12.69□□□□□ -0.38
CLEC4A-201ENST00000229332 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
CLEC4A-201ENST00000229332 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
CLEC4A-201ENST00000229332 FOSBP53539 338 aa12.66□□□□□ -0.38
CLEC4A-201ENST00000229332 MYT1LQ9UL68 1186 aa12.64□□□□□ -0.39
CLEC4A-201ENST00000229332 DPYSL4O14531 572 aa12.63□□□□□ -0.39
CLEC4A-201ENST00000229332 E2F4Q16254 413 aa12.62□□□□□ -0.39
CLEC4A-201ENST00000229332 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
CLEC4A-201ENST00000229332 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
CLEC4A-201ENST00000229332 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
CLEC4A-201ENST00000229332 PSEN2P49810 448 aa12.61□□□□□ -0.39
CLEC4A-201ENST00000229332 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
CLEC4A-201ENST00000229332 TK2O00142 265 aa12.6□□□□□ -0.39
CLEC4A-201ENST00000229332 PTPREP23469 700 aa12.6□□□□□ -0.39
CLEC4A-201ENST00000229332 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
CLEC4A-201ENST00000229332 PHF14O94880 888 aa12.57□□□□□ -0.4
CLEC4A-201ENST00000229332 FBXW7Q969H0 707 aa12.57□□□□□ -0.4
CLEC4A-201ENST00000229332 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
CLEC4A-201ENST00000229332 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
CLEC4A-201ENST00000229332 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
CLEC4A-201ENST00000229332 PDIA6Q15084 440 aa12.54□□□□□ -0.4
CLEC4A-201ENST00000229332 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
CLEC4A-201ENST00000229332 EPAS1Q99814 870 aa12.54□□□□□ -0.4
CLEC4A-201ENST00000229332 TSHZ2Q9NRE2 1034 aa12.54□□□□□ -0.4
CLEC4A-201ENST00000229332 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
CLEC4A-201ENST00000229332 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
CLEC4A-201ENST00000229332 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
CLEC4A-201ENST00000229332 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
CLEC4A-201ENST00000229332 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
CLEC4A-201ENST00000229332 HRO43593 1189 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms