RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 ARID3AQ99856 593 aa22.93■■□□□ 1.26
CDK13-201ENST00000181839 MEX3CQ5U5Q3 659 aaKnown RBP22.93■■□□□ 1.26
CDK13-201ENST00000181839 ANP32EQ9BTT0 268 aa22.93■■□□□ 1.26
CDK13-201ENST00000181839 GGT6Q6P531 493 aa22.92■■□□□ 1.26
CDK13-201ENST00000181839 RAD21O60216 631 aa22.92■■□□□ 1.26
CDK13-201ENST00000181839 A0A0U1RQG5 324 aaPredicted RBP22.91■■□□□ 1.26
CDK13-201ENST00000181839 SUPT16HQ9Y5B9 1047 aaKnown RBP22.9■■□□□ 1.26
CDK13-201ENST00000181839 GTF2E1P29083 439 aaPredicted RBP22.89■■□□□ 1.26
CDK13-201ENST00000181839 HDGFP51858 240 aaKnown RBP22.89■■□□□ 1.25
CDK13-201ENST00000181839 RASSF8Q8NHQ8 419 aa22.88■■□□□ 1.25
CDK13-201ENST00000181839 MCCP23508 829 aa22.88■■□□□ 1.25
CDK13-201ENST00000181839 MIER1Q8N108 512 aa22.87■■□□□ 1.25
CDK13-201ENST00000181839 CHAF1AQ13111 956 aaPredicted RBP22.87■■□□□ 1.25
CDK13-201ENST00000181839 NUTM2FA1L443 756 aa22.86■■□□□ 1.25
CDK13-201ENST00000181839 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
CDK13-201ENST00000181839 KIAA1211Q6ZU35 1233 aa22.84■■□□□ 1.25
CDK13-201ENST00000181839 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.25
CDK13-201ENST00000181839 FBXW7Q969H0 707 aa22.83■■□□□ 1.25
CDK13-201ENST00000181839 MARCH6O60337 910 aa22.83■■□□□ 1.24
CDK13-201ENST00000181839 TOMM22Q9NS69 142 aa22.83■■□□□ 1.24
CDK13-201ENST00000181839 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
CDK13-201ENST00000181839 NUTM2DQ5VT03 806 aaPredicted RBP22.82■■□□□ 1.24
CDK13-201ENST00000181839 HSCBQ8IWL3 235 aa22.81■■□□□ 1.24
CDK13-201ENST00000181839 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
CDK13-201ENST00000181839 EIF4G1Q04637 1599 aaKnown RBP22.8■■□□□ 1.24
CDK13-201ENST00000181839 CWC22Q9HCG8 908 aaKnown RBP22.78■■□□□ 1.24
CDK13-201ENST00000181839 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
CDK13-201ENST00000181839 KANK1Q14678 1352 aa22.77■■□□□ 1.24
CDK13-201ENST00000181839 SAMD1Q6SPF0 538 aaPredicted RBP22.77■■□□□ 1.24
CDK13-201ENST00000181839 L1TD1Q5T7N2 865 aaKnown RBP22.77■■□□□ 1.24
CDK13-201ENST00000181839 EVA1CP58658 441 aa22.75■■□□□ 1.23
CDK13-201ENST00000181839 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
CDK13-201ENST00000181839 NOL8Q76FK4 1167 aaKnown RBP22.74■■□□□ 1.23
CDK13-201ENST00000181839 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
CDK13-201ENST00000181839 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
CDK13-201ENST00000181839 CTDP1Q9Y5B0 961 aaPredicted RBP22.71■■□□□ 1.23
CDK13-201ENST00000181839 PES1O00541 588 aaKnown RBP22.71■■□□□ 1.23
CDK13-201ENST00000181839 MSNP26038 577 aaKnown RBP22.71■■□□□ 1.23
CDK13-201ENST00000181839 TCEAL9Q9UHQ7 104 aa22.71■■□□□ 1.23
CDK13-201ENST00000181839 CEP89Q96ST8 783 aa22.7■■□□□ 1.22
CDK13-201ENST00000181839 HDGFL2Q7Z4V5 671 aaPredicted RBP22.7■■□□□ 1.22
CDK13-201ENST00000181839 SLC4A10Q6U841 1118 aa22.69■■□□□ 1.22
CDK13-201ENST00000181839 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
CDK13-201ENST00000181839 TMF1P82094 1093 aa22.67■■□□□ 1.22
CDK13-201ENST00000181839 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
CDK13-201ENST00000181839 DCAF8L1A6NGE4 600 aa22.67■■□□□ 1.22
CDK13-201ENST00000181839 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
CDK13-201ENST00000181839 MS4A1P11836 297 aa22.66■■□□□ 1.22
CDK13-201ENST00000181839 ITPRIPQ8IWB1 547 aa22.65■■□□□ 1.22
CDK13-201ENST00000181839 NGDNQ8NEJ9 315 aaKnown RBP22.63■■□□□ 1.21
CDK13-201ENST00000181839 GZF1Q9H116 711 aaPredicted RBP22.62■■□□□ 1.21
CDK13-201ENST00000181839 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
CDK13-201ENST00000181839 PPP1R1BQ9UD71 204 aaPredicted RBP22.6■■□□□ 1.21
CDK13-201ENST00000181839 FOXD4L1Q9NU39 408 aa22.59■■□□□ 1.21
CDK13-201ENST00000181839 GPATCH3Q96I76 525 aa22.59■■□□□ 1.21
CDK13-201ENST00000181839 FOXD4L5Q5VV16 416 aaPredicted RBP22.58■■□□□ 1.21
CDK13-201ENST00000181839 FOXD4L4Q8WXT5 416 aaPredicted RBP22.58■■□□□ 1.21
CDK13-201ENST00000181839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDK13-201ENST00000181839 PATL2C9JE40 543 aaKnown RBP22.57■■□□□ 1.2
CDK13-201ENST00000181839 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
CDK13-201ENST00000181839 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDK13-201ENST00000181839 CLIP1P30622 1438 aa22.56■■□□□ 1.2
CDK13-201ENST00000181839 AMPHP49418 695 aa22.56■■□□□ 1.2
CDK13-201ENST00000181839 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
CDK13-201ENST00000181839 TPM4P67936 248 aa22.55■■□□□ 1.2
CDK13-201ENST00000181839 EID1Q9Y6B2 187 aa22.54■■□□□ 1.2
CDK13-201ENST00000181839 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
CDK13-201ENST00000181839 FOXD1Q16676 465 aa22.5■■□□□ 1.19
CDK13-201ENST00000181839 TPD52L1Q16890 204 aaPredicted RBP22.5■■□□□ 1.19
CDK13-201ENST00000181839 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
CDK13-201ENST00000181839 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.48■■□□□ 1.19
CDK13-201ENST00000181839 DHX16O60231 1041 aaKnown RBP22.46■■□□□ 1.19
CDK13-201ENST00000181839 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.18
CDK13-201ENST00000181839 NOL10Q9BSC4 688 aaKnown RBP22.45■■□□□ 1.18
CDK13-201ENST00000181839 GOLGA6L1Q8N7Z2 621 aa22.43■■□□□ 1.18
CDK13-201ENST00000181839 FOXD4L6Q3SYB3 417 aaPredicted RBP22.43■■□□□ 1.18
CDK13-201ENST00000181839 FOXD4L3Q6VB84 417 aaPredicted RBP22.43■■□□□ 1.18
CDK13-201ENST00000181839 MFAP1P55081 439 aaKnown RBP22.43■■□□□ 1.18
CDK13-201ENST00000181839 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
CDK13-201ENST00000181839 HTATSF1O43719 755 aaKnown RBP22.43■■□□□ 1.18
CDK13-201ENST00000181839 VPS37DQ86XT2 251 aa22.42■■□□□ 1.18
CDK13-201ENST00000181839 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
CDK13-201ENST00000181839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.42■■□□□ 1.182e-6■■■■■ 103
CDK13-201ENST00000181839 SF3A1Q15459 793 aaKnown RBP22.41■■□□□ 1.18
CDK13-201ENST00000181839 SLKQ9H2G2 1235 aaPredicted RBP22.4■■□□□ 1.18
CDK13-201ENST00000181839 NECTIN2Q92692 538 aa22.39■■□□□ 1.18
CDK13-201ENST00000181839 AKAP17AQ02040 695 aaKnown RBP22.38■■□□□ 1.17
CDK13-201ENST00000181839 CCDC34Q96HJ3 373 aa22.38■■□□□ 1.17
CDK13-201ENST00000181839 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
CDK13-201ENST00000181839 PCMTD1Q96MG8 357 aaPredicted RBP22.37■■□□□ 1.17
CDK13-201ENST00000181839 C1orf141Q5JVX7 400 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 AMOTL1Q8IY63 956 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 SMC4Q9NTJ3 1288 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 FYB1O15117 783 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 TPM3P06753 285 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 CCAR2Q8N163 923 aaKnown RBP22.36■■□□□ 1.17
CDK13-201ENST00000181839 MTMR7Q9Y216 660 aa22.36■■□□□ 1.17
CDK13-201ENST00000181839 RILPL2Q969X0 211 aa22.35■■□□□ 1.17
CDK13-201ENST00000181839 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
CDK13-201ENST00000181839 H3BQV1 296 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms