RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 PTPRMP28827 1452 aa25.51■■□□□ 1.67
SS18L2-201ENST00000011691 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.67
SS18L2-201ENST00000011691 ZFYVE16Q7Z3T8 1539 aa25.5■■□□□ 1.67
SS18L2-201ENST00000011691 CDK11AQ9UQ88 783 aaPredicted RBP25.5■■□□□ 1.67
SS18L2-201ENST00000011691 RIMS1Q86UR5 1692 aaKnown RBP25.49■■□□□ 1.67
SS18L2-201ENST00000011691 SCAPERQ9BY12 1400 aa25.48■■□□□ 1.67
SS18L2-201ENST00000011691 YEATS2Q9ULM3 1422 aa25.48■■□□□ 1.67
SS18L2-201ENST00000011691 TROQ12816 1431 aaPredicted RBP25.47■■□□□ 1.67
SS18L2-201ENST00000011691 CLIP1P30622 1438 aa25.46■■□□□ 1.67
SS18L2-201ENST00000011691 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
SS18L2-201ENST00000011691 ARHGAP5Q13017 1502 aa25.44■■□□□ 1.66
SS18L2-201ENST00000011691 CDC42BPBQ9Y5S2 1711 aa25.43■■□□□ 1.66
SS18L2-201ENST00000011691 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
SS18L2-201ENST00000011691 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
SS18L2-201ENST00000011691 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
SS18L2-201ENST00000011691 CCDC18Q5T9S5 1454 aa25.4■■□□□ 1.66
SS18L2-201ENST00000011691 PREX2Q70Z35 1606 aa25.37■■□□□ 1.65
SS18L2-201ENST00000011691 FER1L4A9Z1Z3 1794 aa25.37■■□□□ 1.65
SS18L2-201ENST00000011691 FYCO1Q9BQS8 1478 aa25.35■■□□□ 1.65
SS18L2-201ENST00000011691 MLECQ14165 292 aa25.35■■□□□ 1.65
SS18L2-201ENST00000011691 CDC42BPAQ5VT25 1732 aa25.34■■□□□ 1.65
SS18L2-201ENST00000011691 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
SS18L2-201ENST00000011691 ILDR1Q86SU0 546 aaPredicted RBP25.31■■□□□ 1.64
SS18L2-201ENST00000011691 KDM5CP41229 1560 aa25.31■■□□□ 1.64
SS18L2-201ENST00000011691 ATP10AO60312 1499 aa25.3■■□□□ 1.64
SS18L2-201ENST00000011691 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
SS18L2-201ENST00000011691 AFAP1Q8N556 730 aa25.29■■□□□ 1.64
SS18L2-201ENST00000011691 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
SS18L2-201ENST00000011691 MYT1LQ9UL68 1186 aa25.28■■□□□ 1.64
SS18L2-201ENST00000011691 LMTK3Q96Q04 1460 aa25.27■■□□□ 1.64
SS18L2-201ENST00000011691 ABCC1P33527 1531 aa25.27■■□□□ 1.64
SS18L2-201ENST00000011691 DIP2CQ9Y2E4 1556 aa25.25■■□□□ 1.63
SS18L2-201ENST00000011691 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
SS18L2-201ENST00000011691 ARHGEF12Q9NZN5 1544 aa25.23■■□□□ 1.63
SS18L2-201ENST00000011691 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.63
SS18L2-201ENST00000011691 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
SS18L2-201ENST00000011691 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
SS18L2-201ENST00000011691 KIDINS220Q9ULH0 1771 aa25.17■■□□□ 1.62
SS18L2-201ENST00000011691 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
SS18L2-201ENST00000011691 HSPA2P54652 639 aa25.15■■□□□ 1.62
SS18L2-201ENST00000011691 SYCP2Q9BX26 1530 aa25.14■■□□□ 1.62
SS18L2-201ENST00000011691 REREQ9P2R6 1566 aa25.14■■□□□ 1.61
SS18L2-201ENST00000011691 GPATCH8Q9UKJ3 1502 aaKnown RBP25.13■■□□□ 1.61
SS18L2-201ENST00000011691 PREX1Q8TCU6 1659 aa25.11■■□□□ 1.61
SS18L2-201ENST00000011691 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
SS18L2-201ENST00000011691 CEBPAP49715 358 aaPredicted RBP25.1■■□□□ 1.61
SS18L2-201ENST00000011691 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
SS18L2-201ENST00000011691 C3P01024 1663 aa25.07■■□□□ 1.6
SS18L2-201ENST00000011691 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
SS18L2-201ENST00000011691 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.6
SS18L2-201ENST00000011691 SUPT6HQ7KZ85 1726 aaKnown RBP25.05■■□□□ 1.6
SS18L2-201ENST00000011691 AGLP35573 1532 aa25.04■■□□□ 1.6
SS18L2-201ENST00000011691 CFDP1Q9UEE9 299 aaPredicted RBP25.04■■□□□ 1.6
SS18L2-201ENST00000011691 TIAM1Q13009 1591 aa25.04■■□□□ 1.6
SS18L2-201ENST00000011691 EHBP1L1Q8N3D4 1523 aa25.03■■□□□ 1.6
SS18L2-201ENST00000011691 ATP7AQ04656 1500 aa25.01■■□□□ 1.59
SS18L2-201ENST00000011691 SPAG9O60271 1321 aaKnown RBP25■■□□□ 1.59
SS18L2-201ENST00000011691 INO80Q9ULG1 1556 aaPredicted RBP25■■□□□ 1.59
SS18L2-201ENST00000011691 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
SS18L2-201ENST00000011691 SETD1BQ9UPS6 1966 aaKnown RBP24.98■■□□□ 1.59
SS18L2-201ENST00000011691 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
SS18L2-201ENST00000011691 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.59
SS18L2-201ENST00000011691 ZNF644Q9H582 1327 aaPredicted RBP24.94■■□□□ 1.58
SS18L2-201ENST00000011691 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
SS18L2-201ENST00000011691 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
SS18L2-201ENST00000011691 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
SS18L2-201ENST00000011691 FBXO41Q8TF61 875 aa24.92■■□□□ 1.58
SS18L2-201ENST00000011691 MROH2AA6NES4 1674 aa24.91■■□□□ 1.58
SS18L2-201ENST00000011691 CLTCQ00610 1675 aaKnown RBP24.91■■□□□ 1.58
SS18L2-201ENST00000011691 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
SS18L2-201ENST00000011691 PLXNC1O60486 1568 aa24.9■■□□□ 1.58
SS18L2-201ENST00000011691 A2MP01023 1474 aa24.89■■□□□ 1.57
SS18L2-201ENST00000011691 NCOA2Q15596 1464 aa24.88■■□□□ 1.57
SS18L2-201ENST00000011691 CNTLNQ9NXG0 1405 aa24.87■■□□□ 1.57
SS18L2-201ENST00000011691 MBD5Q9P267 1494 aa24.85■■□□□ 1.57
SS18L2-201ENST00000011691 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.56
SS18L2-201ENST00000011691 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
SS18L2-201ENST00000011691 GGT6Q6P531 493 aa24.8■■□□□ 1.56
SS18L2-201ENST00000011691 ZMYM3Q14202 1370 aa24.79■■□□□ 1.56
SS18L2-201ENST00000011691 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
SS18L2-201ENST00000011691 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
SS18L2-201ENST00000011691 CERKQ8TCT0 537 aa24.75■■□□□ 1.55
SS18L2-201ENST00000011691 RTEL1-TNFRSF6BF6WH68 1400 aa24.75■■□□□ 1.55
SS18L2-201ENST00000011691 MYO3AQ8NEV4 1616 aa24.75■■□□□ 1.55
SS18L2-201ENST00000011691 NPATQ14207 1427 aa24.74■■□□□ 1.55
SS18L2-201ENST00000011691 PPP6R1Q9UPN7 881 aa24.72■■□□□ 1.55
SS18L2-201ENST00000011691 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
SS18L2-201ENST00000011691 CAMSAP1Q5T5Y3 1602 aa24.71■■□□□ 1.55
SS18L2-201ENST00000011691 ZNF142P52746 1687 aaPredicted RBP24.7■■□□□ 1.54
SS18L2-201ENST00000011691 ARHGEF5Q12774 1597 aa24.7■■□□□ 1.54
SS18L2-201ENST00000011691 DHX29Q7Z478 1369 aaKnown RBP24.69■■□□□ 1.54
SS18L2-201ENST00000011691 KANK4Q5T7N3 995 aaPredicted RBP24.68■■□□□ 1.54
SS18L2-201ENST00000011691 PTPRKQ15262 1439 aa24.68■■□□□ 1.54
SS18L2-201ENST00000011691 NCOA1Q15788 1441 aa24.68■■□□□ 1.54
SS18L2-201ENST00000011691 ADRA2BP18089 450 aa24.67■■□□□ 1.54
SS18L2-201ENST00000011691 PTPRTO14522 1441 aa24.66■■□□□ 1.54
SS18L2-201ENST00000011691 CEP170BQ9Y4F5 1589 aaPredicted RBP24.66■■□□□ 1.54
SS18L2-201ENST00000011691 KIF3BO15066 747 aa24.65■■□□□ 1.54
SS18L2-201ENST00000011691 MAP3K1Q13233 1512 aa24.64■■□□□ 1.53
SS18L2-201ENST00000011691 RSPH4AQ5TD94 716 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms