RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 Plekhh2Q8C115 1491 aa12□□□□□ -0.49
Bdnf-206ENSMUST00000111046 Rrp7aQ9D1C9 280 aaKnown RBP11.98□□□□□ -0.49
Bdnf-206ENSMUST00000111046 Calr4Q3TQS0 420 aa11.97□□□□□ -0.49
Bdnf-206ENSMUST00000111046 Trak1Q6PD31 939 aa11.97□□□□□ -0.49
Bdnf-206ENSMUST00000111046 Hdac5Q9Z2V6 1113 aa11.96□□□□□ -0.49
Bdnf-206ENSMUST00000111046 AknaQ80VW7 1404 aa11.96□□□□□ -0.49
Bdnf-206ENSMUST00000111046 Dhx57Q6P5D3 1388 aaKnown RBP11.96□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Anp32aO35381 247 aa11.96□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Card11Q8CIS0 1159 aa11.95□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Map4P27546 1125 aaKnown RBP11.95□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Cwc22Q8C5N3 908 aaKnown RBP11.95□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Dennd4bQ3U1Y4 1499 aa11.95□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Lmtk2Q3TYD6 1471 aa11.94□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Ift140E9PY46 1464 aa11.93□□□□□ -0.5
Bdnf-206ENSMUST00000111046 BC005561E9Q5E2 1589 aa11.93□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Eif4g3Q80XI3 1579 aaKnown RBP11.92□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Soga1E1U8D0 1418 aa11.92□□□□□ -0.5
Bdnf-206ENSMUST00000111046 NeflP08551 543 aa11.92□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Usp47Q8BY87 1376 aa11.92□□□□□ -0.5
Bdnf-206ENSMUST00000111046 DiexfQ8BTT6 772 aaKnown RBP11.92□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Naip2Q9QUK4 1447 aa11.91□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Wwc2Q6NXJ0 1187 aa11.9□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Zfp644E9QA22 1323 aa11.9□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Rusc2Q80U22 1514 aa11.9□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Gcc2Q8CHG3 1679 aa11.9□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Cc2d2bA0A286YDU8 1405 aa11.9□□□□□ -0.5
Bdnf-206ENSMUST00000111046 Rundc1Q0VDN7 615 aa11.89□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Dnmt1P13864 1620 aaKnown RBP11.89□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Myt1Q8CFC2 1127 aa11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Cdc42bpaQ3UU96 1719 aa11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 A2mQ6GQT1 1474 aa11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Tdrd9Q14BI7 1383 aa11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Nup155Q99P88 1391 aaKnown RBP11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 SafbD3YXK2 937 aaKnown RBP11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Jph4Q80WT0 628 aa11.88□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Map3k4O08648 1597 aa11.86□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Arhgap31A6X8Z5 1425 aa11.86□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Mroh3A0A1D5RM54 893 aa11.85□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Mroh2aD3Z750 1679 aa11.85□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Arhgef11Q68FM7 1552 aa11.85□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Shroom2A2ALU4 1481 aa11.85□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Ncoa2Q61026 1462 aa11.84□□□□□ -0.51
Bdnf-206ENSMUST00000111046 Smg6P61406 1418 aaKnown RBP11.84□□□□□ -0.51
Bdnf-206ENSMUST00000111046 NexmifQ5DTT1 1515 aa11.84□□□□□ -0.51
Bdnf-206ENSMUST00000111046 P3h3Q8CG70 732 aa11.83□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Exoc6Q8R313 802 aa11.83□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Prdm10Q3UTQ7 1184 aa11.83□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Sart1Q9Z315 806 aaKnown RBP11.83□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Kdm6bQ5NCY0 1641 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Kdm2aP59997 1161 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Ppp4r2Q0VGB7 417 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Mug1P28665 1476 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Kiaa1551Q5DTW7 1521 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Rapgef6Q5NCJ1 1609 aa11.82□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Ofd1Q80Z25 1017 aa11.81□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Gm13695A2AK44 830 aa11.81□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Ncoa3O09000 1398 aa11.8□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Wdr43Q6ZQL4 677 aaKnown RBP11.8□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Fam163aQ8CAA5 168 aa11.8□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Nlrp6Q91WS2 869 aa11.8□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Rad21Q61550 635 aaKnown RBP11.79□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Abcc5Q9R1X5 1436 aa11.79□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Cul7Q8VE73 1689 aa11.79□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Fhod3Q76LL6 1578 aa11.78□□□□□ -0.52
Bdnf-206ENSMUST00000111046 Atp1b4Q99ME6 356 aa11.77□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Arhgef40Q3UPH7 1517 aa11.77□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Arid3cA6PWV5 409 aa11.76□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Ifit1bl1D3Z6F0 470 aa11.76□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Il16O54824 1322 aa11.76□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Setbp1Q9Z180 1582 aa11.75□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Dapk1Q80YE7 1442 aa11.75□□□□□ -0.53
Bdnf-206ENSMUST00000111046 SphkapQ6NSW3 1687 aa11.74□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Ttll5Q8CHB8 1328 aa11.74□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Znf710Q3U288 666 aa11.74□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Upf2A2AT37 1269 aaKnown RBP11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Rtl5Q5DTT4 599 aa11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Fam71e1A1L3C1 212 aa11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Gm20521D3Z5F7 333 aa11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Ccdc141E9Q8Q6 1531 aa11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Naip5Q9R016 1403 aa11.73□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Rfx7F8VPJ6 1459 aa11.72□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Stk24Q99KH8 431 aa11.72□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Dhx9O70133 1380 aaKnown RBP11.72□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Fgd6Q69ZL1 1399 aa11.72□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Magi1Q6RHR9 1471 aa11.71□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Adcy10Q8C0T9 1614 aa11.71□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Srpk2O54781 681 aaKnown RBP11.71□□□□□ -0.53
Bdnf-206ENSMUST00000111046 Chd1P40201 1711 aa11.71□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Lemd3Q9WU40 921 aa11.7□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Kif21bQ9QXL1 1668 aa11.7□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Spag9Q58A65 1321 aaKnown RBP11.7□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Fam208aQ69ZR9 1610 aaKnown RBP11.7□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Mapkbp1Q6NS57 1503 aa11.69□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Arhgef12Q8R4H2 1543 aaKnown RBP11.69□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Kif3bQ61771 747 aa11.69□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Neo1P97798 1493 aa11.68□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Rock2P70336 1388 aa11.68□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Rrbp1Q99PL5 1605 aaKnown RBP11.66□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Prex2Q3LAC4 1598 aa11.66□□□□□ -0.54
Bdnf-206ENSMUST00000111046 Ttbk1Q6PCN3 1308 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms