RNA–Protein interactions for RNA: ENSMUST00000033544.13

Brcc3-201, Transcript of Lys-63-specific deubiquitinase BRCC36, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Brcc3, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3-201ENSMUST00000033544 Map3k1P53349 1493 aa13.06□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Carmil1Q6EDY6 1374 aa13.05□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Ncoa2Q61026 1462 aa13.04□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Grin2bQ01097 1482 aa13.04□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Efcab5A0JP43 1406 aa13.03□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Iqcf3Q9D498 203 aa13.03□□□□□ -0.32
Brcc3-201ENSMUST00000033544 Frmpd1A2AKB4 1549 aa13.02□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Fkbp15Q6P9Q6 1216 aaKnown RBP13.02□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Trak1Q6PD31 939 aa13.01□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Camsap1A2AHC3 1581 aa13.01□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Rpgrip1lQ8CG73 1264 aa13.01□□□□□ -0.33
Brcc3-201ENSMUST00000033544 TnnQ80Z71 1560 aa13□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Q7TT23 1179 aa13□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Ncoa1P70365 1447 aa12.99□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Cux2P70298 1426 aa12.98□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Kif27Q7M6Z4 1394 aa12.98□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Sart3Q9JLI8 962 aaKnown RBP12.98□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Spryd3E9Q9B3 442 aa12.97□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Gm1043A0A140LJC2 1431 aa12.97□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Rad54l2Q99NG0 1466 aa12.97□□□□□ -0.33
Brcc3-201ENSMUST00000033544 4930567H17RikQ3V0K5 233 aa12.96□□□□□ -0.33
Brcc3-201ENSMUST00000033544 Dhx9O70133 1380 aaKnown RBP12.96□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Zfp444Q3TDV8 331 aaKnown RBP12.96□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Pds5bQ4VA53 1446 aaKnown RBP12.95□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Erbb3Q61526 1339 aa12.95□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Dapk1Q80YE7 1442 aa12.95□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Ttll13A4Q9F6 804 aa12.94□□□□□ -0.34
Brcc3-201ENSMUST00000033544 CrbnQ8C7D2 445 aa12.94□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Neurod2Q62414 383 aa12.93□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Cwc22Q8C5N3 908 aaKnown RBP12.93□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Trim30dE9PWL0 497 aa12.92□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Erich3F6QRE9 1637 aa12.92□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Dennd4bQ3U1Y4 1499 aa12.92□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Lamc3Q9R0B6 1581 aa12.92□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Rangap1P46061 589 aaKnown RBP12.91□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Zscan21Q07231 555 aa12.91□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Esx1O88933 382 aa12.91□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Armcx1Q9CX83 456 aa12.91□□□□□ -0.34
Brcc3-201ENSMUST00000033544 LrpprcQ6PB66 1392 aaKnown RBP12.9□□□□□ -0.34
Brcc3-201ENSMUST00000033544 Mtus2Q3UHD3 1353 aa12.89□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Mak16Q8BGS0 296 aaKnown RBP12.89□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Polr3glQ8R0C0 218 aa12.89□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Urb2E9Q7L1 1524 aaKnown RBP12.88□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Lmo7E9PYF4 1699 aaKnown RBP12.88□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Chmp5Q9D7S9 219 aa12.88□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Ercc6F8VPZ5 1481 aa12.88□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Crocc2F6XLV1 1638 aa12.87□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Znf692Q3U381 531 aa12.87□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Ccdc9Q8VC31 543 aaKnown RBP12.87□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Duox2A2AQ99 1517 aa12.86□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Erich6D3Z6S9 713 aa12.86□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Ift140E9PY46 1464 aa12.86□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Camsap2Q8C1B1 1461 aa12.85□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Dnai1Q8C0M8 701 aa12.85□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Os9Q8K2C7 672 aa12.85□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Eif2s2Q99L45 331 aaKnown RBP12.85□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Inpp5dQ9ES52 1191 aa12.84□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Wdr62Q3U3T8 1523 aa12.84□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Trim26Q99PN3 545 aa12.84□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Ttll5Q8CHB8 1328 aa12.84□□□□□ -0.35
Brcc3-201ENSMUST00000033544 Arid4bA2CG63 1314 aaKnown RBP12.83□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Mug1P28665 1476 aa12.83□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Hsp90ab1P11499 724 aaKnown RBP12.83□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Ecm2Q5FW85 670 aa12.83□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Pprc1Q6NZN1 1644 aa12.83□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Pank3Q8R2W9 370 aa12.82□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Prkrip1Q9CWV6 186 aaKnown RBP12.82□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Rprd2Q6NXI6 1469 aaKnown RBP12.82□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Fgd1P52734 960 aa12.82□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Plekhh2Q8C115 1491 aa12.81□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Kdm2aP59997 1161 aa12.81□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Plekhg5Q66T02 1073 aa12.81□□□□□ -0.36
Brcc3-201ENSMUST00000033544 NexmifQ5DTT1 1515 aa12.81□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Map4P27546 1125 aaKnown RBP12.81□□□□□ -0.36
Brcc3-201ENSMUST00000033544 EprsQ8CGC7 1512 aaKnown RBP12.8□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Gm6268A2A3U9 297 aa12.8□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Rrp7aQ9D1C9 280 aaKnown RBP12.8□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Abcc5Q9R1X5 1436 aa12.79□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Soga1E1U8D0 1418 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Ifit1bl1D3Z6F0 470 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 NudcO35685 332 aaKnown RBP12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Nlrp6Q91WS2 869 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Thoc2B1AZI6 1594 aaKnown RBP12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 EspnQ9ET47 871 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Pknox2Q8BG99 474 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Speer4f1Q9D5Q6 258 aa12.78□□□□□ -0.36
Brcc3-201ENSMUST00000033544 Mroh3A0A1D5RM54 893 aa12.77□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Rwdd1Q9CQK7 243 aa12.77□□□□□ -0.37
Brcc3-201ENSMUST00000033544 PogzQ8BZH4 1409 aaKnown RBP12.77□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Dhx57Q6P5D3 1388 aaKnown RBP12.77□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Nkx1-2P42580 305 aa12.76□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Taok2Q6ZQ29 1240 aa12.76□□□□□ -0.37
Brcc3-201ENSMUST00000033544 BC005561E9Q5E2 1589 aa12.76□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Samd9lQ69Z37 1561 aa12.76□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Kank1E9Q238 1360 aa12.75□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Dcaf11Q91VU6 549 aa12.75□□□□□ -0.37
Brcc3-201ENSMUST00000033544 WrnO09053 1401 aa12.75□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Ak7Q9D2H2 614 aa12.74□□□□□ -0.37
Brcc3-201ENSMUST00000033544 CadpsQ80TJ1 1355 aa12.74□□□□□ -0.37
Brcc3-201ENSMUST00000033544 Slc4a1apE9PX68 744 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 84.5 ms