RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Fbxo2Q80UW2 297 aa12.29□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Ppp1r18Q8BQ30 594 aa12.28□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Gm156Q58A37 223 aa12.27□□□□□ -0.44
Ctc1-201ENSMUST00000021278 Grin2bQ01097 1482 aa12.27□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Cc2d2bA0A286YDU8 1405 aa12.26□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Fgd6Q69ZL1 1399 aa12.26□□□□□ -0.45
Ctc1-201ENSMUST00000021278 TnnQ80Z71 1560 aa12.26□□□□□ -0.45
Ctc1-201ENSMUST00000021278 PtprkP35822 1457 aa12.25□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Ccdc88bQ4QRL3 1481 aa12.24□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Mrs2Q5NCE8 434 aa12.24□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Zfp91Q62511 572 aa12.23□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Efcab5A0JP43 1406 aa12.23□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Scaf1Q5U4C3 1256 aaKnown RBP12.21□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Rrp12Q6P5B0 1295 aaKnown RBP12.21□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Tcerg1Q8CGF7 1100 aaKnown RBP12.21□□□□□ -0.45
Ctc1-201ENSMUST00000021278 Znf710Q3U288 666 aa12.19□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Iqcf3Q9D498 203 aa12.19□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Fam50aQ9WV03 339 aaKnown RBP12.19□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Samd9lQ69Z37 1561 aa12.19□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Adgrl3Q80TS3 1537 aa12.19□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Gapvd1Q6PAR5 1458 aa12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Soga1E1U8D0 1418 aa12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Grin2aP35436 1464 aa12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Arid3cA6PWV5 409 aa12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Nup160Q9Z0W3 1402 aaKnown RBP12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Plekhg3Q4VAC9 1341 aa12.17□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Aebp1Q640N1 1128 aa12.16□□□□□ -0.46
Ctc1-201ENSMUST00000021278 B4galnt3Q6L8S8 986 aa12.15□□□□□ -0.46
Ctc1-201ENSMUST00000021278 Dbr1Q923B1 550 aa12.14□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Ythdc2B2RR83 1445 aaKnown RBP12.13□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Chmp4bQ9D8B3 224 aaKnown RBP12.13□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Sart3Q9JLI8 962 aaKnown RBP12.12□□□□□ -0.47
Ctc1-201ENSMUST00000021278 AqrQ8CFQ3 1481 aaKnown RBP12.12□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Trim30dE9PWL0 497 aa12.11□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Arid4bA2CG63 1314 aaKnown RBP12.11□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Hsp90ab1P11499 724 aaKnown RBP12.11□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Htatsf1Q8BGC0 757 aa12.11□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Dnai1Q8C0M8 701 aa12.11□□□□□ -0.47
Ctc1-201ENSMUST00000021278 CadpsQ80TJ1 1355 aa12.09□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Plcb2A3KGF7 1181 aa12.09□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Arhgef5E9Q7D5 1581 aa12.09□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Kiaa1211Q5PR69 1207 aa12.08□□□□□ -0.47
Ctc1-201ENSMUST00000021278 Cep170Q6A065 1588 aa12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Zcchc11B2RX14 1644 aaKnown RBP12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Dusp27Q148W8 1138 aa12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Tshz2Q68FE9 1030 aa12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Magi3Q9EQJ9 1476 aa12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Abcc1O35379 1528 aa12.08□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Paxip1Q6NZQ4 1056 aa12.07□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Erich6bQ9D4S6 220 aa12.07□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Neo1P97798 1493 aa12.07□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Ppm1gQ61074 542 aa12.07□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Rpap1Q80TE0 1409 aa12.06□□□□□ -0.48
Ctc1-201ENSMUST00000021278 PtprtQ99M80 1454 aa12.06□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Arid4aF8VPQ2 1261 aaKnown RBP12.05□□□□□ -0.48
Ctc1-201ENSMUST00000021278 NrkQ9R0G8 1455 aa12.05□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Cers3Q1A3B0 383 aa12.05□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Shroom4Q1W617 1475 aa12.05□□□□□ -0.48
Ctc1-201ENSMUST00000021278 SlkO54988 1233 aa12.04□□□□□ -0.48
Ctc1-201ENSMUST00000021278 BbxQ8VBW5 907 aa12.04□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Gm14025A2AP89 1413 aa12.03□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Ofd1Q80Z25 1017 aa12.03□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Pla2r1Q62028 1487 aa12.02□□□□□ -0.48
Ctc1-201ENSMUST00000021278 Rad21Q61550 635 aaKnown RBP12.02□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Jph4Q80WT0 628 aa12.02□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Tmem132aQ922P8 1018 aa12.01□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Top2aQ01320 1528 aaKnown RBP12.01□□□□□ -0.49
Ctc1-201ENSMUST00000021278 VgfQ0VGU4 617 aa12□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Pbrm1Q8BSQ9 1634 aaKnown RBP12□□□□□ -0.49
Ctc1-201ENSMUST00000021278 MsnP26041 577 aaKnown RBP12□□□□□ -0.49
Ctc1-201ENSMUST00000021278 SynmQ70IV5 1561 aa12□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Setd1bQ8CFT2 1985 aa11.99□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Ddrgk1Q80WW9 315 aa11.99□□□□□ -0.49
Ctc1-201ENSMUST00000021278 MlecQ6ZQI3 291 aaKnown RBP11.98□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Liat1Q810M6 228 aa11.98□□□□□ -0.49
Ctc1-201ENSMUST00000021278 PtmaP26350 111 aa11.98□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Zhx1P70121 873 aa11.97□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Rapgef2Q8CHG7 1496 aa11.97□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Pdia4P08003 638 aaKnown RBP11.97□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Sin3aQ60520 1274 aaKnown RBP11.97□□□□□ -0.49
Ctc1-201ENSMUST00000021278 Fam13bQ8K2H3 851 aa11.96□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Kcnn1Q9EQR3 537 aa11.96□□□□□ -0.5
Ctc1-201ENSMUST00000021278 PxdnQ3UQ28 1475 aa11.96□□□□□ -0.5
Ctc1-201ENSMUST00000021278 EprsQ8CGC7 1512 aaKnown RBP11.95□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Wwc2Q6NXJ0 1187 aa11.94□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Safb2Q80YR5 991 aaKnown RBP11.94□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Fbxo3Q9DC63 480 aa11.94□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Gm6268A2A3U9 297 aa11.93□□□□□ -0.5
Ctc1-201ENSMUST00000021278 WrnO09053 1401 aa11.93□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Mre11Q61216 706 aa11.92□□□□□ -0.5
Ctc1-201ENSMUST00000021278 TchhA0A0B4J1F9 1599 aa11.92□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Samd1D3YXK1 519 aa11.92□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Washc2Q6PGL7 1334 aa11.92□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Phf14Q9D4H9 881 aa11.91□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Tpm2P58774 284 aa11.91□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Carmil1Q6EDY6 1374 aa11.9□□□□□ -0.5
Ctc1-201ENSMUST00000021278 WizO88286 1684 aaKnown RBP11.9□□□□□ -0.5
Ctc1-201ENSMUST00000021278 Egfem1Q8C088 590 aa11.89□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Kcnh8P59111 1102 aa11.89□□□□□ -0.51
Ctc1-201ENSMUST00000021278 Brd2Q7JJ13 798 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms