RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 PDE4DQ08499 809 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 TBC1D8BQ0IIM8 1120 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 HSP90B2PQ58FF3 399 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 RC3H1Q5TC82 1133 aaKnown RBP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 LRRC15Q8TF66 581 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 NHEJ1Q9H9Q4 299 aaPredicted RBP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 C6orf50Q9HD87 102 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 VPS18Q9P253 973 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 TNRC6CQ9HCJ0 1690 aaKnown RBP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 ABCB11O95342 1321 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 LDHCP07864 332 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 RASA1P20936 1047 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 GNA11P29992 359 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 LMAN1P49257 510 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 GYS2P54840 703 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 TXNRD1Q16881 649 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 MIIPQ5JXC2 388 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 CNNM4Q6P4Q7 775 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 SH3RF3Q8TEJ3 882 aaPredicted RBP11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 RUBCNQ92622 972 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 SETDB2Q96T68 719 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
SAMMSON-218ENST00000641601 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 USP17L3A6NCW0 530 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 USP17L4A6NCW7 530 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 TM4SF1P30408 202 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 VAV2P52735 878 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 ASIC1P78348 528 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 CENPPQ6IPU0 288 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 TPTE2Q6XPS3 522 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 USP17L1Q7RTZ2 530 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 NEK8Q86SG6 692 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 TXNRD3Q86VQ6 643 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 NBPF5PQ86XG9 351 aaPredicted RBP11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 SNED1Q8TER0 1413 aa11.31□□□□□ -0.6
SAMMSON-218ENST00000641601 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 hCG_1984214I3L0E3 225 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 ENC1O14682 589 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 KCNQ2O43526 872 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 IVLP07476 585 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 PRLRP16471 622 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 NAPAP54920 295 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 ITIH3Q06033 890 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 SLC20A2Q08357 652 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 RAD51AP2Q09MP3 1159 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 STK4Q13043 487 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 C15orf52Q6ZUT6 534 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 ZNF572Q7Z3I7 529 aaPredicted RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 ZNF713Q8N859 430 aaPredicted RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 PLIN2Q99541 437 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 HDAC6Q9UBN7 1215 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 PVALEFA0A1B0GWK0 134 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 SMCO2A6NFE2 343 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 CCNT1O60563 726 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 LCA5LO95447 670 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 KIF5AQ12840 1032 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 SPA17Q15506 151 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 MMTAG2Q9BU76 263 aaKnown RBP11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 LACRTQ9GZZ8 138 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 STX8Q9UNK0 236 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 PLAGL2Q9UPG8 496 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
SAMMSON-218ENST00000641601 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 CAPN2P17655 700 aa11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 NOVP48745 357 aa11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 ARHGAP27Q6ZUM4 889 aa11.29□□□□□ -0.6
SAMMSON-218ENST00000641601 C16orf86Q6ZW13 317 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms