RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GRAMD1CQ8IYS0 662 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 MLKLQ8NB16 471 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 TRPM4Q8TD43 1214 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 GSDMAQ96QA5 445 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 ANO3Q9BYT9 981 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 TRIM5Q9C035 493 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 KIAA1683Q9H0B3 1180 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 WDR46O15213 610 aaKnown RBP18.57■□□□□ 0.56
PHGDH-216ENST00000641375 TDP2O95551 362 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 TPM2P07951 284 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 STAT6P42226 847 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 MORC3Q14149 939 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 KIFC2Q96AC6 838 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 DDX25Q9UHL0 483 aaKnown RBP18.57■□□□□ 0.56
PHGDH-216ENST00000641375 EDIL3O43854 480 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 CDC25AP30304 524 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 FXR2P51116 673 aaKnown RBP eCLIP18.57■□□□□ 0.561e-6■■■■□ 19.3
PHGDH-216ENST00000641375 DPYDQ12882 1025 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 KARSQ15046 597 aaKnown RBP18.57■□□□□ 0.56
PHGDH-216ENST00000641375 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 CUEDC2Q9H467 287 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 GGA3Q9NZ52 723 aa18.57■□□□□ 0.56
PHGDH-216ENST00000641375 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 PIK3CDO00329 1044 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 SLC37A4O43826 429 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 EPS15P42566 896 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 TECP42680 631 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 TXKP42681 527 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 MOXD1Q6UVY6 613 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-216ENST00000641375 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
PHGDH-216ENST00000641375 LMOD1P29536 600 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-216ENST00000641375 USP14P54578 494 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 PDIA5Q14554 519 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 CT47A1Q5JQC4 288 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-216ENST00000641375 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-216ENST00000641375 CABP7Q86V35 215 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 PLA2G4DQ86XP0 818 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 MAGEF1Q9HAY2 307 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 PITPNM2Q9BZ72 1349 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 PP2D1A8MPX8 630 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 MYL1P05976 194 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 SCYL3Q8IZE3 742 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 RNF181Q9P0P0 153 aa18.55■□□□□ 0.56
PHGDH-216ENST00000641375 CYP3A7-CYP3A51PA0A087WV96 503 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 ESPNB1AK53 854 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 GTPBP6O43824 516 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-216ENST00000641375 BMP6P22004 513 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 CYP3A7P24462 503 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 INPP5BP32019 993 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 ZNF75DP51815 510 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 MYL5Q02045 173 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 MRPL11Q9Y3B7 192 aaKnown RBP18.54■□□□□ 0.56
PHGDH-216ENST00000641375 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 PRPF38AQ8NAV1 312 aaKnown RBP18.54■□□□□ 0.56
PHGDH-216ENST00000641375 CALML4Q96GE6 196 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 LRWD1Q9UFC0 647 aa18.54■□□□□ 0.56
PHGDH-216ENST00000641375 OPLAHO14841 1288 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 MARCH6O60337 910 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 SREBF1P36956 1147 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-216ENST00000641375 NCAPHQ15003 741 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 SUPT20HL1Q3ZLR7 823 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 CCDC174Q6PII3 467 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 CRYGNQ8WXF5 182 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 WRNIP1Q96S55 665 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 WDR18Q9BV38 432 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 ADARB2Q9NS39 739 aaKnown RBP18.53■□□□□ 0.56
PHGDH-216ENST00000641375 SMCHD1A6NHR9 2005 aa18.53■□□□□ 0.56
PHGDH-216ENST00000641375 ABCB11O95342 1321 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 POLR2AP24928 1970 aaKnown RBP18.52■□□□□ 0.56
PHGDH-216ENST00000641375 DDNO94850 711 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-216ENST00000641375 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 MRFAP1L1Q96HT8 127 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 MBOAT7Q96N66 472 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 SLF1Q9BQI6 1058 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 TTC12Q9H892 705 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-216ENST00000641375 RMND1Q9NWS8 449 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 TPM3P06753 285 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 CDC25BP30305 580 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 SEMA3FQ13275 785 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 FBXO28Q9NVF7 368 aa18.52■□□□□ 0.56
PHGDH-216ENST00000641375 ERCC5P28715 1186 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-216ENST00000641375 MTMR2Q13614 643 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 SLFN12Q8IYM2 578 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 STAMQ92783 540 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 MTRQ99707 1265 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 KBTBD4Q9NVX7 518 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 PCDHA12Q9UN75 941 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 GCOM1H8Y6P7 765 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-216ENST00000641375 ICAM1P05362 532 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 POLR2MP0CAP2 368 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 PLCG1P19174 1290 aa18.51■□□□□ 0.55
PHGDH-216ENST00000641375 MSNP26038 577 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms