RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CSF2RAP15509 400 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 CALML3P27482 149 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 ITGA7Q13683 1181 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMN2-216ENST00000638794 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 MYLIPQ8WY64 445 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 ESR2Q92731 530 aa19.81■□□□□ 0.76
SMN2-216ENST00000638794 TMEM265A0A087WTH1 108 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.8■□□□□ 0.76
SMN2-216ENST00000638794 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.8■□□□□ 0.76
SMN2-216ENST00000638794 ZNF213O14771 459 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 ZEB2O60315 1214 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 DUSP28Q4G0W2 176 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 TMEM240Q5SV17 173 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 RNF207Q6ZRF8 634 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 TMEM199Q8N511 208 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
SMN2-216ENST00000638794 WDR19Q8NEZ3 1342 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 LOC102724159A0A0B4J2E5 919 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 GOLGA8HP0CJ92 632 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 ACRP10323 421 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 DNAJB2P25686 324 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 CYP2C18P33260 490 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 PSMC6P62333 389 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 PWP2Q15269 919 aaKnown RBP19.79■□□□□ 0.76
SMN2-216ENST00000638794 MAFAQ8NHW3 353 aaPredicted RBP19.79■□□□□ 0.76
SMN2-216ENST00000638794 WDR11Q9BZH6 1224 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 PNMA2Q9UL42 364 aa19.79■□□□□ 0.76
SMN2-216ENST00000638794 UMODL1Q5DID0 1318 aa19.78■□□□□ 0.76
SMN2-216ENST00000638794 KDM4AO75164 1064 aa19.78■□□□□ 0.76
SMN2-216ENST00000638794 RPS6P62753 249 aaKnown RBP19.78■□□□□ 0.76
SMN2-216ENST00000638794 GPATCH4Q5T3I0 446 aaKnown RBP19.78■□□□□ 0.76
SMN2-216ENST00000638794 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
SMN2-216ENST00000638794 TRPV6Q9H1D0 765 aa19.78■□□□□ 0.76
SMN2-216ENST00000638794 MYH6P13533 1939 aa19.78■□□□□ 0.76
SMN2-216ENST00000638794 B4GALT4O60513 344 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 FOSL2P15408 326 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 RASIP1Q5U651 963 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 PSRC1Q6PGN9 363 aaPredicted RBP19.77■□□□□ 0.76
SMN2-216ENST00000638794 ZNF365Q70YC5 407 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 IQCA1Q86XH1 822 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 SEZ6LQ9BYH1 1024 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 HIPK3Q9H422 1215 aa19.77■□□□□ 0.76
SMN2-216ENST00000638794 SPTBN5Q9NRC6 3674 aaKnown RBP19.76■□□□□ 0.75
SMN2-216ENST00000638794 CHD9Q3L8U1 2897 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 RBM47A0AV96 593 aaKnown RBP19.76■□□□□ 0.75
SMN2-216ENST00000638794 B4E1Z4 1266 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 HIP1O00291 1037 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 EDNRBP24530 442 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 NT5C2P49902 561 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 PDE4DQ08499 809 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 USH1GQ495M9 461 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 UBA5Q9GZZ9 404 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 IL23AQ9NPF7 189 aa19.76■□□□□ 0.75
SMN2-216ENST00000638794 GBF1Q92538 1859 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 GRXCR1A8MXD5 290 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 GRIN2CQ14957 1233 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 CCDC178Q5BJE1 867 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 DNERQ8NFT8 737 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 ANKS1AQ92625 1134 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 TIFAQ96CG3 184 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 ZSCAN10Q96SZ4 725 aaPredicted RBP19.75■□□□□ 0.75
SMN2-216ENST00000638794 MPHOSPH6Q99547 160 aaKnown RBP19.75■□□□□ 0.75
SMN2-216ENST00000638794 DSCC1Q9BVC3 393 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 NOC4LQ9BVI4 516 aaKnown RBP19.75■□□□□ 0.75
SMN2-216ENST00000638794 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 SCN10AQ9Y5Y9 1956 aa19.75■□□□□ 0.75
SMN2-216ENST00000638794 PBX2P40425 430 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 CPT1AP50416 773 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 CCL23P55773 120 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 PURAQ00577 322 aaKnown RBP19.74■□□□□ 0.75
SMN2-216ENST00000638794 PPP2R5BQ15173 497 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 CDC37Q16543 378 aaPredicted RBP19.74■□□□□ 0.75
SMN2-216ENST00000638794 ENAHQ8N8S7 591 aaPredicted RBP19.74■□□□□ 0.75
SMN2-216ENST00000638794 OR6J1Q8NGC5 347 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 COL25A1Q9BXS0 654 aaPredicted RBP19.74■□□□□ 0.75
SMN2-216ENST00000638794 PBX4Q9BYU1 374 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 WNT8AQ9H1J5 351 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 ALDH8A1Q9H2A2 487 aaPredicted RBP19.74■□□□□ 0.75
SMN2-216ENST00000638794 ZNF576Q9H609 170 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
SMN2-216ENST00000638794 MYO9BQ13459 2157 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 MYL3P08590 195 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 IMMTQ16891 758 aaKnown RBP19.73■□□□□ 0.75
SMN2-216ENST00000638794 RGS22Q8NE09 1264 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 SCFD2Q8WU76 684 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 HERVK_113Q902F9 699 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 IL25Q9H293 177 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 TRMT13Q9NUP7 481 aaKnown RBP19.73■□□□□ 0.75
SMN2-216ENST00000638794 CXXC1Q9P0U4 656 aaPredicted RBP19.73■□□□□ 0.75
SMN2-216ENST00000638794 ZSWIM5Q9P217 1185 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 TNKSO95271 1327 aa19.73■□□□□ 0.75
SMN2-216ENST00000638794 NKRFO15226 690 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMN2-216ENST00000638794 ASPRV1Q53RT3 343 aa19.72■□□□□ 0.75
SMN2-216ENST00000638794 ADGRF4Q8IZF3 695 aa19.72■□□□□ 0.75
SMN2-216ENST00000638794 COPS5Q92905 334 aa19.72■□□□□ 0.75
SMN2-216ENST00000638794 MTG1Q9BT17 334 aaPredicted RBP19.72■□□□□ 0.75
SMN2-216ENST00000638794 CHD7Q9P2D1 2997 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms