RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 MAST3O60307 1309 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 GTPBP10A4D1E9 387 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 NUMBP49757 651 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 SLC9C1Q4G0N8 1177 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 ZC3H12BQ5HYM0 836 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 TSNAXIP1Q2TAA8 658 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 ACCSLQ4AC99 568 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 FLOT1O75955 427 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 INPP5BP32019 993 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 LGSNQ5TDP6 509 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 CTSWP56202 376 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 TMED1Q13445 227 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 CEP19Q96LK0 163 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 TBK1Q9UHD2 729 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
CACNA1A-253ENST00000637927 E7EWF7 191 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 DIAPH2O60879 1101 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 SERPIND1P05546 499 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 DNAJC17Q9NVM6 304 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 NEMP1O14524 444 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 THAP12O43422 761 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 ELF2Q15723 593 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 OTUD6AQ7L8S5 288 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 RPGRIP1Q96KN7 1286 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 EIF4E1BA6NMX2 242 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 USP17L21D6R901 530 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 NLRP12P59046 1061 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 DNAAF3Q8N9W5 541 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 CCDC94Q9BW85 323 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 CENPAP49450 140 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 SNX21Q969T3 373 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 PANK4Q9NVE7 773 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 PI4K2BG5E9Z4 385 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 BRD2P25440 801 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 GCKRQ14397 625 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 KRT71Q3SY84 523 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 KRT40Q6A162 431 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 HIPK4Q8NE63 616 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 SLC38A10Q9HBR0 1119 aa18.53■□□□□ 0.56
CACNA1A-253ENST00000637927 ZBTB7BO15156 539 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 ZSCAN9O15535 394 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 MIGA2Q7L4E1 593 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 TRIM37O94972 964 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 CACNB2Q08289 660 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 KCTD1Q719H9 257 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 IFT20Q8IY31 132 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 HSPH1Q92598 858 aa18.52■□□□□ 0.56
CACNA1A-253ENST00000637927 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 NCF2P19878 526 aaPredicted RBP18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 ARHGDIAP52565 204 aa18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 CCDC138Q96M89 665 aa18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 RAP1GDS1P52306 607 aa18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 ERLEC1Q96DZ1 483 aa18.52■□□□□ 0.55
CACNA1A-253ENST00000637927 SUPT3HB4E1H0 165 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 TMEM191BP0C7N4 346 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 SUPT20HQ8NEM7 779 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 SNX19Q92543 992 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 ABHD8Q96I13 439 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 ADPGKQ9BRR6 497 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 HS1BP3Q53T59 392 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 CUTAO60888 179 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 WBP4O75554 376 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 IFNAR2P48551 515 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 CCDC38Q502W7 563 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 DDX25Q9UHL0 483 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 TOM1L1O75674 476 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 CD58P19256 250 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 BTDP43251 543 aa18.51■□□□□ 0.55
CACNA1A-253ENST00000637927 RGS16O15492 202 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 CLTAP09496 248 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 RASSF2P50749 326 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 PPP1R36Q96LQ0 422 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 SOX11P35716 441 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 RPS6KA1Q15418 735 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 FAM186BQ8IYM0 893 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 ORC6Q9Y5N6 252 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 MROH5Q6ZUA9 1318 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 MAGEA1P43355 309 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 NXF1Q9UBU9 619 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 CFAP69A5D8W1 941 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 CLIC6Q96NY7 704 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 TRAIPQ9BWF2 469 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 PRPF4O43172 522 aaKnown RBP eCLIP18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 TTC4O95801 387 aa18.5■□□□□ 0.55
CACNA1A-253ENST00000637927 TAGAPQ8N103 731 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms