RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NT5C2P49902 561 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 ITGA7Q13683 1181 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 DUSP28Q4G0W2 176 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 TMEM240Q5SV17 173 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
CLN6-220ENST00000637450 TMEM199Q8N511 208 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 GRIN2DO15399 1336 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 NEDD4P46934 1319 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 CUL9Q8IWT3 2517 aa21.69■■□□□ 1.06
CLN6-220ENST00000637450 RBM47A0AV96 593 aaKnown RBP21.68■■□□□ 1.06
CLN6-220ENST00000637450 GPATCH4Q5T3I0 446 aaKnown RBP21.68■■□□□ 1.06
CLN6-220ENST00000637450 ZKSCAN3Q9BRR0 538 aa21.68■■□□□ 1.06
CLN6-220ENST00000637450 PPP1R12CQ9BZL4 782 aa21.68■■□□□ 1.06
CLN6-220ENST00000637450 WDR19Q8NEZ3 1342 aa21.68■■□□□ 1.06
CLN6-220ENST00000637450 HIP1O00291 1037 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 CALML3P27482 149 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 CCDC178Q5BJE1 867 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 SLC30A10Q6XR72 485 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 RNF207Q6ZRF8 634 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 ANKS1AQ92625 1134 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 WDR11Q9BZH6 1224 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 DIAPH3Q9NSV4 1193 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 EYSQ5T1H1 3165 aa21.67■■□□□ 1.06
CLN6-220ENST00000637450 GOLGA8HP0CJ92 632 aa21.66■■□□□ 1.06
CLN6-220ENST00000637450 CYP2C18P33260 490 aa21.66■■□□□ 1.06
CLN6-220ENST00000637450 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CLN6-220ENST00000637450 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
CLN6-220ENST00000637450 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.66■■□□□ 1.06
CLN6-220ENST00000637450 MYLIPQ8WY64 445 aa21.66■■□□□ 1.06
CLN6-220ENST00000637450 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
CLN6-220ENST00000637450 KDM4AO75164 1064 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 ACRP10323 421 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 EDNRBP24530 442 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 PSMC6P62333 389 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 ZNF365Q70YC5 407 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 PNMA1Q8ND90 353 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 DNERQ8NFT8 737 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 DSCC1Q9BVC3 393 aa21.65■■□□□ 1.06
CLN6-220ENST00000637450 DNAJB2P25686 324 aa21.64■■□□□ 1.05
CLN6-220ENST00000637450 PSRC1Q6PGN9 363 aaPredicted RBP21.64■■□□□ 1.05
CLN6-220ENST00000637450 MAFAQ8NHW3 353 aaPredicted RBP21.64■■□□□ 1.05
CLN6-220ENST00000637450 TRPV6Q9H1D0 765 aa21.64■■□□□ 1.05
CLN6-220ENST00000637450 CPVLQ9H3G5 476 aa21.64■■□□□ 1.05
CLN6-220ENST00000637450 HIPK3Q9H422 1215 aa21.64■■□□□ 1.05
CLN6-220ENST00000637450 IL23AQ9NPF7 189 aa21.64■■□□□ 1.05
CLN6-220ENST00000637450 B4GALT4O60513 344 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 PDE4DQ08499 809 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 ZSCAN10Q96SZ4 725 aaPredicted RBP21.63■■□□□ 1.05
CLN6-220ENST00000637450 MPHOSPH6Q99547 160 aaKnown RBP21.63■■□□□ 1.05
CLN6-220ENST00000637450 MAF1Q9H063 256 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 KAT14Q9H8E8 782 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 POLR3EQ9NVU0 708 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 ZSWIM5Q9P217 1185 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 CTNNA3Q9UI47 895 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 PRUNE2Q8WUY3 3088 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 LCTP09848 1927 aa21.63■■□□□ 1.05
CLN6-220ENST00000637450 UMODL1Q5DID0 1318 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 B4E1Z4 1266 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 CPT1AP50416 773 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 GRIN2CQ14957 1233 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 IMMTQ16891 758 aaKnown RBP21.62■■□□□ 1.05
CLN6-220ENST00000637450 USH1GQ495M9 461 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
CLN6-220ENST00000637450 HERVK_113Q902F9 699 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 TIFAQ96CG3 184 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 NOC4LQ9BVI4 516 aaKnown RBP21.62■■□□□ 1.05
CLN6-220ENST00000637450 ALDH8A1Q9H2A2 487 aaPredicted RBP21.62■■□□□ 1.05
CLN6-220ENST00000637450 LRRC37A2A6NM11 1700 aa21.62■■□□□ 1.05
CLN6-220ENST00000637450 B4DLN1 442 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 NKRFO15226 690 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLN6-220ENST00000637450 FOSL2P15408 326 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
CLN6-220ENST00000637450 PURAQ00577 322 aaKnown RBP21.61■■□□□ 1.05
CLN6-220ENST00000637450 ADGRF4Q8IZF3 695 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 OR6J1Q8NGC5 347 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 ZNF576Q9H609 170 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 VCANP13611 3396 aa21.61■■□□□ 1.05
CLN6-220ENST00000637450 GRXCR1A8MXD5 290 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 FGBP02675 491 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 CCL23P55773 120 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 CDC37Q16543 378 aaPredicted RBP21.6■■□□□ 1.05
CLN6-220ENST00000637450 ASPRV1Q53RT3 343 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 PBX4Q9BYU1 374 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 KRT23Q9C075 422 aa21.6■■□□□ 1.05
CLN6-220ENST00000637450 MYL3P08590 195 aa21.59■■□□□ 1.05
CLN6-220ENST00000637450 PBX2P40425 430 aa21.59■■□□□ 1.05
CLN6-220ENST00000637450 PPP2R5BQ15173 497 aa21.59■■□□□ 1.05
CLN6-220ENST00000637450 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
CLN6-220ENST00000637450 MTG1Q9BT17 334 aaPredicted RBP21.59■■□□□ 1.05
CLN6-220ENST00000637450 COL25A1Q9BXS0 654 aaPredicted RBP21.59■■□□□ 1.05
CLN6-220ENST00000637450 WNT8AQ9H1J5 351 aa21.59■■□□□ 1.05
CLN6-220ENST00000637450 IL25Q9H293 177 aa21.59■■□□□ 1.05
CLN6-220ENST00000637450 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
CLN6-220ENST00000637450 CXXC1Q9P0U4 656 aaPredicted RBP21.59■■□□□ 1.05
CLN6-220ENST00000637450 TNKSO95271 1327 aa21.58■■□□□ 1.05
CLN6-220ENST00000637450 ABCB11O95342 1321 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms