RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 REPS2Q8NFH8 660 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 PSTPIP2Q9H939 334 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ICAM1P05362 532 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 PTPREP23469 700 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 GJA5P36382 358 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 INHBEP58166 350 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ATP2C1P98194 919 aaPredicted RBP17.45■□□□□ 0.38
CTSD-211ENST00000637387 ZNF174Q15697 407 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 C4orf32Q8N8J7 132 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ATG4CQ96DT6 458 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 OTUD5Q96G74 571 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 CLIC6Q96NY7 704 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
CTSD-211ENST00000637387 A0A0G2JLL6 359 aaPredicted RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 MANSC4A6NHS7 340 aaPredicted RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 NR1I2O75469 434 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 TBC1D8O95759 1140 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 PPIL2Q13356 520 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 ZSCAN23Q3MJ62 389 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 TREML2Q5T2D2 321 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 CATSPERGQ6ZRH7 1159 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 PRRT2Q7Z6L0 340 aaPredicted RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 CCAR1Q8IX12 1150 aaKnown RBP17.44■□□□□ 0.38
CTSD-211ENST00000637387 AGBL1Q96MI9 1066 aa17.44■□□□□ 0.38
CTSD-211ENST00000637387 FAM237AA0A1B0GTK4 181 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 GOLGA6L4A6NEF3 574 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 CUTAO60888 179 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 MCM7P33993 719 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 SNW1Q13573 536 aaKnown RBP17.43■□□□□ 0.38
CTSD-211ENST00000637387 MOGSQ13724 837 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 NEK8Q86SG6 692 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 FSIP1Q8NA03 581 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 MRPS27Q92552 414 aaKnown RBP17.43■□□□□ 0.38
CTSD-211ENST00000637387 ANO3Q9BYT9 981 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 GLT8D2Q9H1C3 349 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
CTSD-211ENST00000637387 CEP131Q9UPN4 1083 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 SRPRBQ9Y5M8 271 aaKnown RBP17.43■□□□□ 0.38
CTSD-211ENST00000637387 ABCB11O95342 1321 aa17.43■□□□□ 0.38
CTSD-211ENST00000637387 PIK3CDO00329 1044 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 VWA5AO00534 786 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 BMP15O95972 392 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 DSG3P32926 999 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 PTGDRQ13258 359 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
CTSD-211ENST00000637387 TBC1D5Q92609 795 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 TMEM60Q9H2L4 133 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 R3HDMLQ9H3Y0 253 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 DACT1Q9NYF0 836 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 MYPNQ86TC9 1320 aa17.42■□□□□ 0.38
CTSD-211ENST00000637387 TESPA1A2RU30 521 aaPredicted RBP17.41■□□□□ 0.38
CTSD-211ENST00000637387 SPDYE16A6NNV3 312 aaPredicted RBP17.41■□□□□ 0.38
CTSD-211ENST00000637387 CXCL11O14625 94 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 IL17AQ16552 155 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 RESP18Q5W5W9 173 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
CTSD-211ENST00000637387 ZNF296Q8WUU4 475 aaPredicted RBP17.41■□□□□ 0.38
CTSD-211ENST00000637387 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
CTSD-211ENST00000637387 CCPG1Q9ULG6 757 aa17.41■□□□□ 0.38
CTSD-211ENST00000637387 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 GPR25O00155 361 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 ALDH1A1P00352 501 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 PFKFB1P16118 471 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 CMA1P23946 247 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 NDUFA8P51970 172 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 GHRHRQ02643 423 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 FAM160A1Q05DH4 1040 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 TRAF1Q13077 416 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 CCDC183Q5T5S1 534 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 FMR1NBQ8N0W7 255 aaPredicted RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 CLEC4DQ8WXI8 215 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 ZNF214Q9UL59 606 aaPredicted RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 IGF2BP3O00425 579 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTSD-211ENST00000637387 TDP2O95551 362 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 FDX1P10109 184 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 COG2Q14746 738 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
CTSD-211ENST00000637387 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 DDX19AQ9NUU7 478 aaKnown RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 MRPL11Q9Y3B7 192 aaKnown RBP17.4■□□□□ 0.38
CTSD-211ENST00000637387 LRRC37A2A6NM11 1700 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms