RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 U2AF1L4Q8WU68 220 aaKnown RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 CLEC4DQ8WXI8 215 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 GLT8D2Q9H1C3 349 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 SPC25Q9HBM1 224 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 FLRT1Q9NZU1 646 aa9.49□□□□□ -0.89
PNKP-226ENST00000636840 V9GY48 417 aaPredicted RBP9.49□□□□□ -0.89
PNKP-226ENST00000636840 PARP14Q460N5 1801 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 SEPT4O43236 478 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 CDKL5O76039 1030 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 RARBP10826 455 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 EN2P19622 333 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 PDE4DQ08499 809 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 SSRP1Q08945 709 aaKnown RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 TRIM32Q13049 653 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 ACVR2BQ13705 512 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 ARHGEF16Q5VV41 709 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 ARMCX2Q7L311 632 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 TEX2Q8IWB9 1127 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 CMTR1Q8N1G2 835 aaKnown RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 ANKLE1Q8NAG6 615 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 CCDC12Q8WUD4 166 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 IWS1Q96ST2 819 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 SLKQ9H2G2 1235 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 PSTPIP2Q9H939 334 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 ZHX1Q9UKY1 873 aaPredicted RBP9.48□□□□□ -0.89
PNKP-226ENST00000636840 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
PNKP-226ENST00000636840 ZSWIM8A7E2V4 1837 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 CYBAP13498 195 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 AKR1A1P14550 325 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 IFNAR1P17181 557 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 CCND3P30281 292 aaPredicted RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 RGS19P49795 217 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 ALDH5A1P51649 535 aaPredicted RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 MLLT1Q03111 559 aaPredicted RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 TOB2Q14106 344 aaPredicted RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 STXBP2Q15833 593 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 PRAMEF19Q5SWL8 479 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 MCTP2Q6DN12 878 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 IQSEC1Q6DN90 963 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 NOL8Q76FK4 1167 aaKnown RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 HEATR3Q7Z4Q2 680 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 IL17RAQ96F46 866 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 RMDN3Q96TC7 470 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 EHMT1Q9H9B1 1298 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 VTA1Q9NP79 307 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 DDX20Q9UHI6 824 aaKnown RBP9.47□□□□□ -0.89
PNKP-226ENST00000636840 PLXNB2O15031 1838 aa9.47□□□□□ -0.89
PNKP-226ENST00000636840 POTEFA5A3E0 1075 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 ST18O60284 1047 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 ZNF865P0CJ78 1059 aaPredicted RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 XBP1P17861 261 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 CDC27P30260 824 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 HSD17B4P51659 736 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 AK2P54819 239 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 NAPAP54920 295 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 STK3Q13188 491 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 NECAB2Q7Z6G3 386 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 RNF180Q86T96 592 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 SYTL5Q8TDW5 730 aaPredicted RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 TAAR1Q96RJ0 339 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.9
PNKP-226ENST00000636840 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 AP5M1Q9H0R1 490 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 OGDHLQ9ULD0 1010 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 MYH6P13533 1939 aa9.46□□□□□ -0.9
PNKP-226ENST00000636840 hCG_1642624A0A1W2PR95 340 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 ZEB2O60315 1214 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 PPP1R11O60927 126 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 DUSP11O75319 330 aaKnown RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 EIF3JO75822 258 aaKnown RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 IGHA2P01877 340 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 NR3C2P08235 984 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 SCG2P13521 617 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 TAL1P17542 331 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 GNA11P29992 359 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 GHRHRQ02643 423 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 RABEP1Q15276 862 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
PNKP-226ENST00000636840 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
PNKP-226ENST00000636840 CCDC144BQ3MJ40 725 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms