RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TRPV6Q9H1D0 765 aa18.3■□□□□ 0.52
SNRNP48-203ENST00000634363 RAD50Q92878 1312 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 PLA2G6O60733 806 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 IGFBP4P22692 258 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 SLC16A2P36021 539 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 CCDC85BQ15834 202 aaPredicted RBP18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 RASIP1Q5U651 963 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 TTBK2Q6IQ55 1244 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 TAPT1Q6NXT6 567 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 HERVK_113Q902F9 699 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 CXXC1Q9P0U4 656 aaPredicted RBP18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 CDH23Q9H251 3354 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 GBF1Q92538 1859 aa18.29■□□□□ 0.52
SNRNP48-203ENST00000634363 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 B4GALT4O60513 344 aa18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 HSPD1P10809 573 aaKnown RBP18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 TJAP1Q5JTD0 557 aa18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 NKX2-4Q9H2Z4 354 aa18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 GPCPD1Q9NPB8 672 aa18.28■□□□□ 0.52
SNRNP48-203ENST00000634363 FOXP2O15409 715 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 ICAM1P05362 532 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 CHMLP26374 656 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 ALX1Q15699 326 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 RAB30Q15771 203 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 SLC28A3Q9HAS3 691 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 Q9Y3F1 56 aa18.27■□□□□ 0.52
SNRNP48-203ENST00000634363 ZMYM6O95789 1325 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 FRMPD2Q68DX3 1309 aaPredicted RBP18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 PTPDC1A2A3K4 754 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 RABGGTBP53611 331 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 DCAF4Q8WV16 495 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 SCLYQ96I15 445 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 WDR11Q9BZH6 1224 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 ADD3Q9UEY8 706 aaKnown RBP18.26■□□□□ 0.51
SNRNP48-203ENST00000634363 LCTP09848 1927 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 ZBBXA8MT70 800 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 FGAP02671 866 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 MYL3P08590 195 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 CALML3P27482 149 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 RPUSD2Q8IZ73 545 aaKnown RBP18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 NOC4LQ9BVI4 516 aaKnown RBP18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 ANAPC4Q9UJX5 808 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 LRRC37A2A6NM11 1700 aa18.25■□□□□ 0.51
SNRNP48-203ENST00000634363 NFIBO00712 420 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 ALDH5A1P51649 535 aaPredicted RBP18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 ADGRE1Q14246 886 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 SYDE2Q5VT97 1194 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 CASC1Q6TDU7 716 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 TMEM47Q9BQJ4 181 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 SEZ6LQ9BYH1 1024 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 YBX2Q9Y2T7 364 aaKnown RBP18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 PRUNE2Q8WUY3 3088 aa18.24■□□□□ 0.51
SNRNP48-203ENST00000634363 ORC4O43929 436 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 TOP1P11387 765 aaKnown RBP18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 CYP2C9P11712 490 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 MYOGP15173 224 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 AKNAD1Q5T1N1 836 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 DEFB128Q7Z7B8 93 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 MORC4Q8TE76 937 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 TRMT13Q9NUP7 481 aaKnown RBP18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 POLR3EQ9NVU0 708 aa18.23■□□□□ 0.51
SNRNP48-203ENST00000634363 VCANP13611 3396 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 TNFRSF10AO00220 468 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 SUPT20HL2P0C7V6 817 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 HAND2P61296 217 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 BTNL9Q6UXG8 535 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 OR6J1Q8NGC5 347 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 IL25Q9H293 177 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 CTNNA3Q9UI47 895 aa18.22■□□□□ 0.51
SNRNP48-203ENST00000634363 SGSM2O43147 1006 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 NOVP48745 357 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 CPT1AP50416 773 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 PDE4DQ08499 809 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 PPP2R2DQ66LE6 453 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 MICALL1Q8N3F8 863 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 ATXN2LQ8WWM7 1075 aaKnown RBP18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 TNKSO95271 1327 aa18.21■□□□□ 0.51
SNRNP48-203ENST00000634363 SCN5AQ14524 2016 aa18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 ZNF213O14771 459 aa18.2■□□□□ 0.5
SNRNP48-203ENST00000634363 CDC45O75419 566 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms