RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 VPS16Q9H269 839 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 EXOC1Q9NV70 894 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 LRWD1Q9UFC0 647 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 TPM1P09493 284 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 ASIC1P78348 528 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 AOC3Q16853 763 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 CREBRFQ8IUR6 639 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 CPLX3Q8WVH0 158 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 13.8
PHACTR4-206ENST00000632421 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 RGPD4Q7Z3J3 1758 aa13.73□□□□□ -0.21
PHACTR4-206ENST00000632421 TRIM49BA6NDI0 452 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 RAD21O60216 631 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 MFAP3LO75121 409 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 RXRBP28702 533 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 ZNF771Q7L3S4 317 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 SH3BP5LQ7L8J4 393 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 MKL1Q969V6 931 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 EDIL3O43854 480 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 SLU7O95391 586 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 DHTKD1Q96HY7 919 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 PSTPIP2Q9H939 334 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 SLC1A4P43007 532 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 PDE4DQ08499 809 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 CCDC51Q96ER9 411 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 ERO1AQ96HE7 468 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
PHACTR4-206ENST00000632421 GYPCP04921 128 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 CASP14P31944 242 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 SLFN13Q68D06 897 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 CDK5RAP3Q96JB5 506 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 STK17AQ9UEE5 414 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 GRB10Q13322 594 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 TRIM14Q14142 442 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 PDIA5Q14554 519 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 SV2BQ7L1I2 683 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 IRF2BP1Q8IU81 584 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 NOC3LQ8WTT2 800 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
PHACTR4-206ENST00000632421 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.22
PHACTR4-206ENST00000632421 PPP1R2P41236 205 aa13.71□□□□□ -0.22
PHACTR4-206ENST00000632421 ICA1Q05084 483 aa13.71□□□□□ -0.22
PHACTR4-206ENST00000632421 TMEM179Q6ZVK1 233 aa13.71□□□□□ -0.22
PHACTR4-206ENST00000632421 DDX25Q9UHL0 483 aaKnown RBP13.71□□□□□ -0.22
PHACTR4-206ENST00000632421 SOWAHDA6NJG2 315 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 GCFC2P16383 781 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 SEPT2Q15019 361 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 SRRTQ9BXP5 876 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 MAGEC2Q9UBF1 373 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 MYH7BA7E2Y1 1941 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 BICDL2A1A5D9 508 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 FXR1P51114 621 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 UBXN1Q04323 297 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 MTF1Q14872 753 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 CC2D2BQ6DHV5 1058 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 DESI2Q9BSY9 194 aa13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 TDRD3Q9H7E2 651 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-206ENST00000632421 POTEMA6NI47 508 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 CCDC175P0C221 793 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 PDE4CQ08493 712 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 CCDC93Q567U6 631 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 KRT79Q5XKE5 535 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 P2RX5Q93086 422 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 CCNE1P24864 410 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 STK4Q13043 487 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 CDC37Q16543 378 aaPredicted RBP13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 ABCB5Q2M3G0 1257 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 SNX29Q8TEQ0 813 aa13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 ATF5Q9Y2D1 282 aaPredicted RBP13.69□□□□□ -0.22
PHACTR4-206ENST00000632421 PCDHA1Q9Y5I3 950 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms