RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 MROH8Q9H579 483 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 SH3GLB2Q9NR46 395 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 ORC3Q9UBD5 711 aaPredicted RBP11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 CPA4Q9UI42 421 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 RIPK3Q9Y572 518 aa11.36□□□□□ -0.59
SOX2-OT-249ENST00000628810 PCNTO95613 3336 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 OPLAHO14841 1288 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 MAPK4P31152 587 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 PIBF1Q8WXW3 757 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 PORCNQ9H237 461 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 MRPL11Q9Y3B7 192 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 PLXNB2O15031 1838 aa11.35□□□□□ -0.59
SOX2-OT-249ENST00000628810 GPR25O00155 361 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 TAL1P17542 331 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ERCC3P19447 782 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 GJB2P29033 226 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 PLS1Q14651 629 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 USH1GQ495M9 461 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 SAMD3Q8N6K7 520 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCDC148Q8NFR7 591 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 COA7Q96BR5 231 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ZMYND12Q9H0C1 365 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ACAD9Q9H845 621 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 SMC3Q9UQE7 1217 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 KIF3AQ9Y496 699 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 MGAMO43451 1857 aa11.34□□□□□ -0.59
SOX2-OT-249ENST00000628810 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 NFIBO00712 420 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 PPP1R37O75864 691 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 ALAS1P13196 640 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 HSD17B4P51659 736 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 NAPAP54920 295 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 SP3Q02447 781 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 NPY5RQ15761 445 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 GPR142Q7Z601 462 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 NCAPG2Q86XI2 1143 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 PHF20Q9BVI0 1012 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 GLT8D2Q9H1C3 349 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 RIC8AQ9NPQ8 531 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 LCTP09848 1927 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 PFASO15067 1338 aa11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
SOX2-OT-249ENST00000628810 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 STRNO43815 780 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 DTNBO60941 627 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 XBP1P17861 261 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 CTGFP29279 349 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 GRB14Q14449 540 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 FAM184AQ8NB25 1140 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 FBXO18Q8NFZ0 1043 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 A1CFQ9NQ94 594 aaKnown RBP11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 FRMPD4Q14CM0 1322 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
SOX2-OT-249ENST00000628810 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 M0R2N6 131 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 MEIS2O14770 477 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 FKTNO75072 461 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 GNRH1P01148 92 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 MMP1P03956 469 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 FCER1AP12319 257 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 PTPREP23469 700 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 CALML3P27482 149 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 GNA11P29992 359 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 ADCY7P51828 1080 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 FCGRTP55899 365 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 MORN1Q5T089 497 aa11.31□□□□□ -0.6
SOX2-OT-249ENST00000628810 PLEKHH3Q7Z736 793 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms