RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TKFCQ3LXA3 575 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 FASTKD5Q7L8L6 764 aaKnown RBP13.41□□□□□ -0.26
LINC00963-220ENST00000625171 NEK8Q86SG6 692 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 MB21D1Q8N884 522 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 KRI1Q8N9T8 703 aaKnown RBP13.41□□□□□ -0.26
LINC00963-220ENST00000625171 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 FBXO28Q9NVF7 368 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
LINC00963-220ENST00000625171 FZD1Q9UP38 647 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
LINC00963-220ENST00000625171 FLOT1O75955 427 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 CYP3A4P08684 503 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 CIITAP33076 1130 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 HUNKP57058 714 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
LINC00963-220ENST00000625171 MCF2L2Q86YR7 1114 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 TBCKQ8TEA7 893 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 SLC10A4Q96EP9 437 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.26
LINC00963-220ENST00000625171 FBXO2Q9UK22 296 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-220ENST00000625171 HPSEQ9Y251 543 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
LINC00963-220ENST00000625171 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.27
LINC00963-220ENST00000625171 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 EDIL3O43854 480 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 HSD17B4P51659 736 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 ZNF445P59923 1031 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 PTGDRQ13258 359 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 SNW1Q13573 536 aaKnown RBP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 MOGSQ13724 837 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 PRKG1Q13976 671 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 INF2Q27J81 1249 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 RESP18Q5W5W9 173 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■■□□ 16.7
LINC00963-220ENST00000625171 C2orf69Q8N8R5 385 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 MRPS27Q92552 414 aaKnown RBP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
LINC00963-220ENST00000625171 GBA2Q9HCG7 927 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 BIN2Q9UBW5 565 aaPredicted RBP13.39□□□□□ -0.27
LINC00963-220ENST00000625171 CTAGE5O15320 804 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 ZBTB48P10074 688 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 LONP1P36776 959 aaKnown RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 SREBF1P36956 1147 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 SNAPC2Q13487 334 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 CCDC183Q5T5S1 534 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 FMR1NBQ8N0W7 255 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 CLMNQ96JQ2 1002 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 AK8Q96MA6 479 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-220ENST00000625171 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 RLFQ13129 1914 aa13.38□□□□□ -0.27
LINC00963-220ENST00000625171 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 GCOM1H8Y6P7 765 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 WNT7AO00755 349 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 TBX3O15119 743 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 POLR2MP0CAP2 368 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 TTLL12Q14166 644 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 PDIA5Q14554 519 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 ZNF174Q15697 407 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 CCDC73Q6ZRK6 1079 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
LINC00963-220ENST00000625171 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
LINC00963-220ENST00000625171 LOC285556D6RIA3 1793 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 SPDYE3A6NKU9 549 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-220ENST00000625171 SLC26A4O43511 780 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 LIG1P18858 919 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 MARCKSP29966 332 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-220ENST00000625171 USH1GQ495M9 461 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 Q4G0T1 1027 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
LINC00963-220ENST00000625171 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
LINC00963-220ENST00000625171 ATG4CQ96DT6 458 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
LINC00963-220ENST00000625171 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms