RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 RIPK3Q9Y572 518 aa23.2■■□□□ 1.3
PCDHB12-203ENST00000624949 CCL15-CCL14A0A0B4J2E2 113 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 SPDYE3A6NKU9 549 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 CCNT1O60563 726 aaKnown RBP23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 CETPP11597 493 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 ZNF157P51786 506 aaPredicted RBP23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 PABPC4Q13310 644 aaKnown RBP eCLIP23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 CCL15Q16663 113 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 SAPCD2Q86UD0 394 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 CLEC4DQ8WXI8 215 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 TRERF1Q96PN7 1200 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 ANO3Q9BYT9 981 aa23.19■■□□□ 1.3
PCDHB12-203ENST00000624949 OSBPP22059 807 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 OAZ1P54368 228 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 PIK3CDO00329 1044 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 PPP6R2O75170 966 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 MBD3O95983 291 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 ZBTB48P10074 688 aaPredicted RBP23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 HERVK_113P62684 666 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 PTGDRQ13258 359 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 AP3B2Q13367 1082 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 ZSCAN23Q3MJ62 389 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 JMYQ8N9B5 988 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 PNMA2Q9UL42 364 aa23.18■■□□□ 1.3
PCDHB12-203ENST00000624949 LBX2Q6XYB7 198 aa23.17■■□□□ 1.3
PCDHB12-203ENST00000624949 PAGR1Q9BTK6 254 aa23.17■■□□□ 1.3
PCDHB12-203ENST00000624949 TEX13BQ9BXU2 312 aa23.17■■□□□ 1.3
PCDHB12-203ENST00000624949 RNF146Q9NTX7 359 aa23.17■■□□□ 1.3
PCDHB12-203ENST00000624949 STAT3P40763 770 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 MRE11P49959 708 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 BRI3BPQ8WY22 251 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 CLIC6Q96NY7 704 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 GRPEL1Q9HAV7 217 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 TMEM63CQ9P1W3 806 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 BTBD7Q9P203 1132 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 TOMM70O94826 608 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 FOSP01100 380 aaPredicted RBP23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 ZNF445P59923 1031 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 ADALQ6DHV7 355 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 MCF2L2Q86YR7 1114 aa23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 ABT1Q9ULW3 272 aaKnown RBP23.16■■□□□ 1.3
PCDHB12-203ENST00000624949 BTBD19C9JJ37 291 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 ATP2A1O14983 1001 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 BMP15O95972 392 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 RGMBQ6NW40 437 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 RASAL3Q86YV0 1011 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 KRI1Q8N9T8 703 aaKnown RBP23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 MYH7BA7E2Y1 1941 aa23.15■■□□□ 1.3
PCDHB12-203ENST00000624949 PDHXO00330 501 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 EDIL3O43854 480 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 TDP2O95551 362 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 CYP2C8P10632 490 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 YY1P25490 414 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 ATP2C1P98194 919 aaPredicted RBP23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 AXDND1Q5T1B0 1012 aaPredicted RBP23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 NSMFQ6X4W1 530 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 CCAR1Q8IX12 1150 aaKnown RBP23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 MB21D1Q8N884 522 aa23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 FBXO2Q9UK22 296 aaPredicted RBP23.14■■□□□ 1.3
PCDHB12-203ENST00000624949 LIG1P18858 919 aa23.14■■□□□ 1.29
PCDHB12-203ENST00000624949 GRIN1Q05586 938 aa23.14■■□□□ 1.29
PCDHB12-203ENST00000624949 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
PCDHB12-203ENST00000624949 HSD17B4P51659 736 aa23.13■■□□□ 1.29
PCDHB12-203ENST00000624949 TMEM60Q9H2L4 133 aa23.13■■□□□ 1.29
PCDHB12-203ENST00000624949 PNMA3Q9UL41 463 aa23.13■■□□□ 1.29
PCDHB12-203ENST00000624949 TLL2Q9Y6L7 1015 aa23.13■■□□□ 1.29
PCDHB12-203ENST00000624949 NEMFO60524 1076 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 PTPREP23469 700 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 UBXN2AP68543 259 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 ARHGAP4P98171 946 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 SPECC1Q5M775 1068 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 RNF207Q6ZRF8 634 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 C4orf32Q8N8J7 132 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 FSIP1Q8NA03 581 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 SRPRBQ9Y5M8 271 aaKnown RBP23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 CUTAO60888 179 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 RPS6P62753 249 aaKnown RBP23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 SLC30A10Q6XR72 485 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 FAM43AQ8N2R8 423 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 SMCR8Q8TEV9 937 aaPredicted RBP23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 PANK2Q9BZ23 570 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 SPATC1LQ9H0A9 340 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 GOLPH3LQ9H4A5 285 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 TXNRD2Q9NNW7 524 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 COL20A1Q9P218 1284 aa23.12■■□□□ 1.29
PCDHB12-203ENST00000624949 A0A1B0GVL5 298 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 CNMDO75829 334 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 SREBF1P36956 1147 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 ANKRD23Q86SG2 305 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 POTEDQ86YR6 584 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 TEX2Q8IWB9 1127 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 PTPN18Q99952 460 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 ACAD9Q9H845 621 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 RBPJLQ9UBG7 517 aa23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 RBBP6Q7Z6E9 1792 aaKnown RBP23.11■■□□□ 1.29
PCDHB12-203ENST00000624949 A0A1W2PQ27 194 aa23.1■■□□□ 1.29
PCDHB12-203ENST00000624949 A0A1W2PQ64 194 aa23.1■■□□□ 1.29
PCDHB12-203ENST00000624949 A0A1W2PQD8 194 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms