RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 IQCKQ8N0W5 287 aa15.68■□□□□ 0.1
LDB3-209ENST00000623056 ZNF473Q8WTR7 871 aaKnown RBP15.68■□□□□ 0.1
LDB3-209ENST00000623056 SDR42E1Q8WUS8 393 aa15.68■□□□□ 0.1
LDB3-209ENST00000623056 ARHGAP20Q9P2F6 1191 aa15.68■□□□□ 0.1
LDB3-209ENST00000623056 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
LDB3-209ENST00000623056 ARAP2Q8WZ64 1704 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 KIF11P52732 1056 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 APBA1Q02410 837 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 HLFQ16534 295 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 PTGISQ16647 500 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 RASSF8Q8NHQ8 419 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 ERGIC2Q96RQ1 377 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 NOC4LQ9BVI4 516 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 ANAPC4Q9UJX5 808 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 BAZ2BQ9UIF8 2168 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 PP2D1A8MPX8 630 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 FAM153BP0C7A2 387 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 HNRNPH3P31942 346 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 CARSP49589 748 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 FAM153CQ494X1 144 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 EMC10Q5UCC4 262 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 IFT20Q8IY31 132 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
LDB3-209ENST00000623056 CD248Q9HCU0 757 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 FAM153AQ9UHL3 310 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 NFU1Q9UMS0 254 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 PLAGL2Q9UPG8 496 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 MROH5Q6ZUA9 1318 aa15.67■□□□□ 0.1
LDB3-209ENST00000623056 PPP1R37O75864 691 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 GLI1P08151 1106 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 CALM1P0DP23 149 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 CALM2P0DP24 149 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 CALM3P0DP25 149 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 MYH3P11055 1940 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 NR1D1P20393 614 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 EIF4A3P38919 411 aaKnown RBP15.66■□□□□ 0.1
LDB3-209ENST00000623056 GLE1Q53GS7 698 aaKnown RBP15.66■□□□□ 0.1
LDB3-209ENST00000623056 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
LDB3-209ENST00000623056 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 RPAINQ86UA6 219 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 PIK3R5Q8WYR1 880 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 P2RX5Q93086 422 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 PLIN2Q99541 437 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 VCPKMTQ9H867 229 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 GDF3Q9NR23 364 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 PLCH1Q4KWH8 1693 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 NKRFO15226 690 aaKnown RBP eCLIP15.66■□□□□ 0.1
LDB3-209ENST00000623056 DDAH1O94760 285 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 LCA5LO95447 670 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 SCG2P13521 617 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
LDB3-209ENST00000623056 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 FAM114A1Q8IWE2 563 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 ZKSCAN4Q969J2 545 aaPredicted RBP15.66■□□□□ 0.1
LDB3-209ENST00000623056 TLR10Q9BXR5 811 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 DONSONQ9NYP3 566 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 SALL4Q9UJQ4 1053 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 CEP83Q9Y592 693 aa15.66■□□□□ 0.1
LDB3-209ENST00000623056 ESYT3A0FGR9 886 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 MYL1P05976 194 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 CCNE1P24864 410 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 SEC24CP53992 1094 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 HDLBPQ00341 1268 aaKnown RBP15.65■□□□□ 0.1
LDB3-209ENST00000623056 ACTN3Q08043 901 aaPredicted RBP15.65■□□□□ 0.1
LDB3-209ENST00000623056 ADGRA1Q86SQ6 560 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 MYCBPAPQ8TBZ2 947 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 MS4A14Q96JA4 679 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 CCT8L2Q96SF2 557 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 KBTBD4Q9NVX7 518 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 BICDL2A1A5D9 508 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 ZSCAN5CA6NGD5 496 aaPredicted RBP15.65■□□□□ 0.1
LDB3-209ENST00000623056 CHUKO15111 745 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 EPHB6O15197 1021 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 PAK2Q13177 524 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 CD302Q8IX05 232 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 MREGQ8N565 214 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 IFT81Q8WYA0 676 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 KLC4Q9NSK0 619 aa15.65■□□□□ 0.1
LDB3-209ENST00000623056 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
LDB3-209ENST00000623056 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 AKR1B10O60218 316 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 PDE8AO60658 829 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 TOM1O60784 492 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 CYP7A1P22680 504 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 MDH1P40925 334 aaKnown RBP15.64■□□□□ 0.09
LDB3-209ENST00000623056 SMTNP53814 917 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 GUCY2DQ02846 1103 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 DTHD1Q6ZMT9 781 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 CCDC13Q8IYE1 715 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 ANKRD13CQ8N6S4 541 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 LRRC15Q8TF66 581 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 EPB41L5Q9HCM4 733 aa15.64■□□□□ 0.09
LDB3-209ENST00000623056 DUOX1Q9NRD9 1551 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms