RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 OPLAHO14841 1288 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 MRPL12P52815 198 aaKnown RBP12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 HMGCS2P54868 508 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 BACE1P56817 501 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 LETM2Q2VYF4 491 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 TMEM60Q9H2L4 133 aa12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 RPAP3Q9H6T3 665 aaPredicted RBP12.32□□□□□ -0.44
AP001065.3-201ENST00000622854 EDIL3O43854 480 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 USP14P54578 494 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 IL17AQ16552 155 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 IER5LQ5T953 404 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 USP49Q70CQ1 688 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 MOB2Q70IA6 237 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 FERMT2Q96AC1 680 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 P2RX7Q99572 595 aaKnown RBP12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 FUCA2Q9BTY2 467 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
AP001065.3-201ENST00000622854 VWA3AA6NCI4 1184 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 SOCS7O14512 581 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 MEIS2O14770 477 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 CCNT1O60563 726 aaKnown RBP12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 FLOT1O75955 427 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 ZNF202O95125 648 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 SYKP43405 635 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 IREB2P48200 963 aaKnown RBP12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 C12orf42Q96LP6 360 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 ANO3Q9BYT9 981 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 GLT8D2Q9H1C3 349 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 AFG3L2Q9Y4W6 797 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 A0A0G2JMZ2 1700 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 ZNF536O15090 1300 aa12.3□□□□□ -0.44
AP001065.3-201ENST00000622854 SLC37A4O43826 429 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 NEMFO60524 1076 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 TDP2O95551 362 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 HOXA13P31271 388 aaPredicted RBP12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 NF2P35240 595 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 EPSTI1Q96J88 318 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 AGBL1Q96MI9 1066 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 ELP3Q9H9T3 547 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 GRPEL1Q9HAV7 217 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 KCNH3Q9ULD8 1083 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 CSADQ9Y600 493 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 ABCB11O95342 1321 aa12.29□□□□□ -0.44
AP001065.3-201ENST00000622854 A0A087X0B3 334 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 TRAF5O00463 557 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 CTAGE5O15320 804 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 ICAM1P05362 532 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 AP3B2Q13367 1082 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 MAP1SQ66K74 1059 aaPredicted RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 PRPF38AQ8NAV1 312 aaKnown RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 TBC1D5Q92609 795 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 ERCC4Q92889 916 aaPredicted RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 ATG4CQ96DT6 458 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 SLC38A10Q9HBR0 1119 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 CCPG1Q9ULG6 757 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
AP001065.3-201ENST00000622854 PP2D1A8MPX8 630 aa12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 PRPHP41219 470 aa12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 TYRO3Q06418 890 aa12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 TRAF1Q13077 416 aa12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 LONRF3Q496Y0 759 aa12.27□□□□□ -0.45
AP001065.3-201ENST00000622854 SH3D19Q5HYK7 790 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms