RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 Q9Y3F1 56 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 GRIN2DO15399 1336 aa10.97□□□□□ -0.65
TARDBP-227ENST00000622057 UMODL1Q5DID0 1318 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 MYL3P08590 195 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 PDHBP11177 359 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 SDSP20132 328 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 DUSP28Q4G0W2 176 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 AKNAD1Q5T1N1 836 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 PSRC1Q6PGN9 363 aaPredicted RBP10.96□□□□□ -0.65
TARDBP-227ENST00000622057 OTOP2Q7RTS6 562 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 PPM1EQ8WY54 764 aa10.96□□□□□ -0.65
TARDBP-227ENST00000622057 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
TARDBP-227ENST00000622057 ZNF213O14771 459 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 B4GALT4O60513 344 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 GOLGA8HP0CJ92 632 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 RPS6P62753 249 aaKnown RBP10.95□□□□□ -0.66
TARDBP-227ENST00000622057 ZNF543Q08ER8 600 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 USH1GQ495M9 461 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 OR6J1Q8NGC5 347 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 CLEC4DQ8WXI8 215 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 SCLYQ96I15 445 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 SEZ6LQ9BYH1 1024 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 UBA5Q9GZZ9 404 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 RWDD1Q9H446 243 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-227ENST00000622057 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-227ENST00000622057 MSRAQ9UJ68 235 aa10.95□□□□□ -0.66
TARDBP-227ENST00000622057 CPT1AP50416 773 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 PDE4DQ08499 809 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 FAM47CQ5HY64 1035 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 RPUSD2Q8IZ73 545 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 PPP1R13LQ8WUF5 828 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 HERVK_113Q902F9 699 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 ESR2Q92731 530 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 YTHDC1Q96MU7 727 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 GAS2L1Q99501 681 aaPredicted RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 MPHOSPH6Q99547 160 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 NOC4LQ9BVI4 516 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 MTIF3Q9H2K0 278 aaKnown RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 PRDM12Q9H4Q4 367 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
TARDBP-227ENST00000622057 PNMA2Q9UL42 364 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 MCM3APO60318 1980 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 UNC80Q8N2C7 3258 aa10.94□□□□□ -0.66
TARDBP-227ENST00000622057 ZMYM6O95789 1325 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 B4DLN1 442 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 IGHDP01880 384 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 SUPT20HL2P0C7V6 817 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 SNHG28P0DPA3 235 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 PCP11498 1178 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 CYP2C9P11712 490 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 MRPL12P52815 198 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 PURAQ00577 322 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 PPP2R5BQ15173 497 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 RAB30Q15771 203 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 BRDTQ58F21 947 aaPredicted RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 CHD1LQ86WJ1 897 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 PLEKHM2Q8IWE5 1019 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 USP38Q8NB14 1042 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 TBC1D5Q92609 795 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 COPS5Q92905 334 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 ALDH8A1Q9H2A2 487 aaPredicted RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 RNF39Q9H2S5 420 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 NKX2-4Q9H2Z4 354 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 SLC28A3Q9HAS3 691 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 VAT1LQ9HCJ6 419 aa10.93□□□□□ -0.66
TARDBP-227ENST00000622057 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 RNF216Q9NWF9 866 aaPredicted RBP10.93□□□□□ -0.66
TARDBP-227ENST00000622057 NEDD4P46934 1319 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 KDM4AO75164 1064 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 TXNP10599 105 aaKnown RBP10.92□□□□□ -0.66
TARDBP-227ENST00000622057 IGFBP4P22692 258 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 RABGGTBP53611 331 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 GPATCH4Q5T3I0 446 aaKnown RBP10.92□□□□□ -0.66
TARDBP-227ENST00000622057 DEFB128Q7Z7B8 93 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 SMC5Q8IY18 1101 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 DNERQ8NFT8 737 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 MTG1Q9BT17 334 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-227ENST00000622057 KAT14Q9H8E8 782 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 PRDM6Q9NQX0 595 aa10.92□□□□□ -0.66
TARDBP-227ENST00000622057 DIAPH3Q9NSV4 1193 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms