RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 EDIL3O43854 480 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 ORC2Q13416 577 aaPredicted RBP14.6□□□□□ -0.07
SKP2-209ENST00000620197 ARHGAP27Q6ZUM4 889 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 BAP1Q92560 729 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 NIP7Q9Y221 180 aaKnown RBP eCLIP14.6□□□□□ -0.07
SKP2-209ENST00000620197 BICDL2A1A5D9 508 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 EPHB6O15197 1021 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
SKP2-209ENST00000620197 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 QSER1Q2KHR3 1735 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 ATXN2Q99700 1313 aaKnown RBP14.59□□□□□ -0.07
SKP2-209ENST00000620197 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
SKP2-209ENST00000620197 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
SKP2-209ENST00000620197 PLCG1P19174 1290 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 CSGALNACT2Q8N6G5 542 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 RASGRP4Q8TDF6 673 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 TAF1LQ8IZX4 1826 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 ERFEQ4G0M1 354 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 PACS2Q86VP3 889 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 ANKRD18AQ8IVF6 992 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
SKP2-209ENST00000620197 TRIM47Q96LD4 638 aa14.59□□□□□ -0.07
SKP2-209ENST00000620197 CRNKL1Q9BZJ0 848 aaKnown RBP14.59□□□□□ -0.07
SKP2-209ENST00000620197 C10orf71Q711Q0 1435 aa14.58□□□□□ -0.07
SKP2-209ENST00000620197 PLEKP08567 350 aaPredicted RBP14.58□□□□□ -0.07
SKP2-209ENST00000620197 CAVIN4Q5BKX8 364 aa14.58□□□□□ -0.07
SKP2-209ENST00000620197 PLCD3Q8N3E9 789 aa14.58□□□□□ -0.07
SKP2-209ENST00000620197 TRIM58Q8NG06 486 aa14.58□□□□□ -0.07
SKP2-209ENST00000620197 HDAC7Q8WUI4 952 aa14.58□□□□□ -0.07
SKP2-209ENST00000620197 RIN2Q8WYP3 895 aaPredicted RBP14.58□□□□□ -0.07
SKP2-209ENST00000620197 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
SKP2-209ENST00000620197 SKOR1P84550 965 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 C2orf54Q08AI8 447 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 TXNRD1Q16881 649 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
SKP2-209ENST00000620197 MTMR9Q96QG7 549 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 SPZ1Q9BXG8 430 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 LOC102724428A0A0B4J2F2 783 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 BHMG1C9JSJ3 638 aaPredicted RBP14.58□□□□□ -0.08
SKP2-209ENST00000620197 SIK1P57059 783 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 PDE4CQ08493 712 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 HGSNATQ68CP4 663 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 HAUS3Q68CZ6 603 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 LRRC55Q6ZSA7 311 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 SALL4Q9UJQ4 1053 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
SKP2-209ENST00000620197 PHACTR2O75167 634 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 FCER1AP12319 257 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 GSPT2Q8IYD1 628 aaKnown RBP14.57□□□□□ -0.08
SKP2-209ENST00000620197 BLOC1S4Q9NUP1 217 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 LRWD1Q9UFC0 647 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 CYP27A1Q02318 531 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 TBC1D8BQ0IIM8 1120 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 NNTQ13423 1086 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 EZH2Q15910 746 aaKnown RBP14.57□□□□□ -0.08
SKP2-209ENST00000620197 INF2Q27J81 1249 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 SPATA4Q8NEY3 305 aa14.57□□□□□ -0.08
SKP2-209ENST00000620197 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
SKP2-209ENST00000620197 EXOC5O00471 708 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 IDEP14735 1019 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 PRDX5P30044 214 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 IRAK1P51617 712 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 VWA3BQ502W6 1294 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 LRRC1Q9BTT6 524 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 KAT14Q9H8E8 782 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 DMGDHQ9UI17 866 aaKnown RBP14.56□□□□□ -0.08
SKP2-209ENST00000620197 GNAQP50148 359 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 IQCEQ6IPM2 695 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 KIAA1328Q86T90 577 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 CABP7Q86V35 215 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 CAPZA3Q96KX2 299 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 OSBPL9Q96SU4 736 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 PAGR1Q9BTK6 254 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 EDEM3Q9BZQ6 932 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 MAGEC2Q9UBF1 373 aaPredicted RBP14.56□□□□□ -0.08
SKP2-209ENST00000620197 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 OR52Z1P0C646 297 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 TRIM21P19474 475 aaKnown RBP14.56□□□□□ -0.08
SKP2-209ENST00000620197 ZCWPW2Q504Y3 356 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
SKP2-209ENST00000620197 RRP36Q96EU6 259 aaKnown RBP14.56□□□□□ -0.08
SKP2-209ENST00000620197 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 TLR10Q9BXR5 811 aa14.56□□□□□ -0.08
SKP2-209ENST00000620197 ZMYND10O75800 440 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 MYBP10242 640 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 GRB10Q13322 594 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 CCDC155Q8N6L0 562 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 PNMA5Q96PV4 448 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 GDF3Q9NR23 364 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 LRRC37AA6NMS7 1700 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 KAT6BQ8WYB5 2073 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 PVALEFA0A1B0GWK0 134 aa14.55□□□□□ -0.08
SKP2-209ENST00000620197 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms