RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 OLFML3Q9NRN5 406 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 NEK9Q8TD19 979 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 ARHGAP45Q92619 1136 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 PHACTR3Q96KR7 559 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 SCP2P22307 547 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 FSCBQ5H9T9 825 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 ZC3H12BQ5HYM0 836 aaKnown RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 MYD88Q99836 296 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 TUBA8Q9NY65 449 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 NSFP46459 744 aaKnown RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 RAB44Q7Z6P3 723 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 NAF1Q96HR8 494 aaKnown RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 VCAM1P19320 739 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 KPNB1Q14974 876 aaKnown RBP16.28■□□□□ 0.2
COL5A1-208ENST00000618395 ETNK1Q9HBU6 452 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 DKK3Q9UBP4 350 aa16.28■□□□□ 0.2
COL5A1-208ENST00000618395 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 EHHADHQ08426 723 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 TTLL3Q9Y4R7 772 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 ABCB4P21439 1286 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 DAB2IPQ5VWQ8 1189 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 SUCLA2Q9P2R7 463 aaPredicted RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 MYH9P35579 1960 aaKnown RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 RNF103-CHMP3A0A140T963 221 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 ZPR1O75312 459 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 RPS6KB1P23443 525 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 GGCXP38435 758 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 RINT1Q6NUQ1 792 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 DCLK2Q8N568 766 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 PAPOLAP51003 745 aaKnown RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 GPT2Q8TD30 523 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 MAGOHBQ96A72 148 aaKnown RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
COL5A1-208ENST00000618395 PAPOLBQ9NRJ5 636 aaKnown RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
COL5A1-208ENST00000618395 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 E2F6O75461 281 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 SERPINB4P48594 390 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.19
COL5A1-208ENST00000618395 KIF17Q9P2E2 1029 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 CAND2O75155 1236 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 GRK2P25098 689 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 MORC3Q14149 939 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 OTUD6AQ7L8S5 288 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 B4GALNT2Q8NHY0 566 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 SMYD2Q9NRG4 433 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 ANKRD12Q6UB98 2062 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 ZFYVE1Q9HBF4 777 aa16.27■□□□□ 0.19
COL5A1-208ENST00000618395 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PKD2L2Q9NZM6 624 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 KIAA1107Q9UPP5 1409 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 IL16Q14005 1332 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 DEPDC1Q5TB30 811 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 RNF34Q969K3 372 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 CDK19Q9BWU1 502 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 ENC1O14682 589 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PFDN6O15212 129 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 RPN1P04843 607 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PDE1BQ01064 536 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PNOCQ13519 176 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 BTNL9Q6UXG8 535 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 PGRMC1O00264 195 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 TOM1L1O75674 476 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 KRT81Q14533 505 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 KLC2Q9H0B6 622 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 MBD2Q9UBB5 411 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 KIF11P52732 1056 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 GRIN1Q05586 938 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 BZW2Q9Y6E2 419 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 NVLO15381 856 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 CYP2C19P33261 490 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 HSPA9P38646 679 aaKnown RBP16.26■□□□□ 0.19
COL5A1-208ENST00000618395 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 CHST3Q7LGC8 479 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 NLRP14Q86W24 1093 aa16.26■□□□□ 0.19
COL5A1-208ENST00000618395 ZNF839A8K0R7 811 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 ZFYVE19Q96K21 471 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 A0A0G2JND7 137 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 EFCAB14O75071 495 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 CATSPER3Q86XQ3 398 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 TRMT44Q8IYL2 757 aaKnown RBP16.25■□□□□ 0.19
COL5A1-208ENST00000618395 SNX25Q9H3E2 840 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 PDP2Q9P2J9 529 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 TCHHQ07283 1943 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 SAT1P21673 171 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 ZNF174Q15697 407 aa16.25■□□□□ 0.19
COL5A1-208ENST00000618395 ANKRD44Q8N8A2 993 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms