RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 NEDD1Q8NHV4 660 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 ZSWIM5Q9P217 1185 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 CYP46A1Q9Y6A2 500 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 LCTP09848 1927 aa17.33■□□□□ 0.36
UBXN1-218ENST00000616865 ZNF536O15090 1300 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 IFIT3O14879 490 aaKnown RBP17.32■□□□□ 0.36
UBXN1-218ENST00000616865 CTAGE5O15320 804 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 PRC1O43663 620 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 RASIP1Q5U651 963 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 DHX32Q7L7V1 743 aaKnown RBP17.32■□□□□ 0.36
UBXN1-218ENST00000616865 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
UBXN1-218ENST00000616865 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 VTI1AQ96AJ9 217 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 TIFAQ96CG3 184 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 PPP1R12CQ9BZL4 782 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 A1CFQ9NQ94 594 aaKnown RBP17.32■□□□□ 0.36
UBXN1-218ENST00000616865 GBF1Q92538 1859 aa17.32■□□□□ 0.36
UBXN1-218ENST00000616865 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 TLR3O15455 904 aaKnown RBP17.31■□□□□ 0.36
UBXN1-218ENST00000616865 CSF2RAP15509 400 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 CNTN2Q02246 1040 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 PSRC1Q6PGN9 363 aaPredicted RBP17.31■□□□□ 0.36
UBXN1-218ENST00000616865 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 CHST3Q7LGC8 479 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 TMEM199Q8N511 208 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 GMCL1Q96IK5 515 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
UBXN1-218ENST00000616865 PBX4Q9BYU1 374 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 RNF146Q9NTX7 359 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 ISY1Q9ULR0 285 aaKnown RBP17.31■□□□□ 0.36
UBXN1-218ENST00000616865 MUC3AQ02505 3323 aa17.31■□□□□ 0.36
UBXN1-218ENST00000616865 ASTN1O14525 1302 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
UBXN1-218ENST00000616865 CPA1P15085 419 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 RPS6KB1P23443 525 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 RUFY3Q7L099 469 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 SYMPKQ92797 1274 aaKnown RBP17.3■□□□□ 0.36
UBXN1-218ENST00000616865 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
UBXN1-218ENST00000616865 ZSWIM6Q9HCJ5 1215 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
UBXN1-218ENST00000616865 TNKSO95271 1327 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 ASB14A6NK59 587 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 CD4P01730 458 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 PBX2P40425 430 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 SLC1A4P43007 532 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 BEX3Q00994 111 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
UBXN1-218ENST00000616865 WTAPQ15007 396 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 TLK2Q86UE8 772 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 PDRG1Q9NUG6 133 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 TCP11L1Q9NUJ3 509 aa17.29■□□□□ 0.36
UBXN1-218ENST00000616865 GNEQ9Y223 722 aaKnown RBP17.29■□□□□ 0.36
UBXN1-218ENST00000616865 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 NMT2O60551 498 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 PLA2G6O60733 806 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 ACRP10323 421 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 NEK4P51957 841 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 RABEP1Q15276 862 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
UBXN1-218ENST00000616865 CXCL17Q6UXB2 119 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
UBXN1-218ENST00000616865 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 TCEANC2Q96MN5 208 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 LRRC2Q9BYS8 371 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
UBXN1-218ENST00000616865 CABYRO75952 493 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 ALAS1P13196 640 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 CYP2C18P33260 490 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 ANTXR2P58335 489 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
UBXN1-218ENST00000616865 TJAP1Q5JTD0 557 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 KCTD1Q719H9 257 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 RASGRP2Q7LDG7 609 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 TMTC2Q8N394 836 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 TTC14Q96N46 770 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 GAS2L1Q99501 681 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-218ENST00000616865 IL23AQ9NPF7 189 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
UBXN1-218ENST00000616865 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-218ENST00000616865 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms