RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 FGFR1OPO95684 399 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 FBF1Q8TES7 1133 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 STAG1Q8WVM7 1258 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 HPS3Q969F9 1004 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 DDX47Q9H0S4 455 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 NOP53Q9NZM5 478 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 UTP11Q9Y3A2 253 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 AP1G2O75843 785 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 UPP2O95045 317 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 NEFHP12036 1026 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 POLE2P56282 527 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 KLHL30Q0D2K2 578 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 ACCSLQ4AC99 568 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 KDM7AQ6ZMT4 941 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 GOLPH3Q9H4A6 298 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 TRMT112Q9UI30 125 aaKnown RBP17.22■□□□□ 0.35
SYNRG-223ENST00000616179 TNKSO95271 1327 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 NEXMIFQ5QGS0 1516 aa17.22■□□□□ 0.35
SYNRG-223ENST00000616179 SHOX2O60902 331 aaPredicted RBP17.21■□□□□ 0.35
SYNRG-223ENST00000616179 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
SYNRG-223ENST00000616179 POLR2FP61218 127 aaKnown RBP17.21■□□□□ 0.35
SYNRG-223ENST00000616179 PPP2R2AP63151 447 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 AMPD3Q01432 767 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 KCNB1Q14721 858 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 CCNHP51946 323 aaPredicted RBP17.21■□□□□ 0.35
SYNRG-223ENST00000616179 MMGT1Q8N4V1 131 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 TMEM110-MUSTN1A8MSY1 372 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 EVI5O60447 810 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 ANP32DO95626 131 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 LLGL1Q15334 1064 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 CCDC26Q8TAB7 109 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.35
SYNRG-223ENST00000616179 FBXL5Q9UKA1 691 aa17.21■□□□□ 0.35
SYNRG-223ENST00000616179 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 LRRC53A6NM62 1247 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 SNAP23O00161 211 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 HIP1RO75146 1068 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 SLC1A4P43007 532 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 TRADDQ15628 312 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 SH3GL3Q99963 347 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 ADAMTS1Q9UHI8 967 aa17.21■□□□□ 0.34
SYNRG-223ENST00000616179 ALKQ9UM73 1620 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 GRIN2DO15399 1336 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 H0Y3Z8 333 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PLEKHA8P1O95397 391 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 MMEP08473 750 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 SFMBT2Q5VUG0 894 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 VSIG1Q86XK7 387 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 LMNTD2Q8IXW0 634 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 IFNL2Q8IZJ0 200 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PHKA1P46020 1223 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 CREG2Q8IUH2 290 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 SPDYE1Q8NFV5 336 aaPredicted RBP17.2■□□□□ 0.34
SYNRG-223ENST00000616179 CUL5Q93034 780 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PSMD2Q13200 908 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 LRRC41Q15345 812 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 CHRNA2Q15822 529 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 ZFYVE27Q5T4F4 411 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PEX26Q7Z412 305 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
SYNRG-223ENST00000616179 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
SYNRG-223ENST00000616179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
SYNRG-223ENST00000616179 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
SYNRG-223ENST00000616179 OTUD6AQ7L8S5 288 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 NELFCDQ8IXH7 590 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 IGDCC4Q8TDY8 1250 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 CASKIN2Q8WXE0 1202 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 TSC22D3Q99576 134 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 TSKSQ9UJT2 592 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 TRIM37O94972 964 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 GCP02774 474 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 ADD2P35612 726 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 LRRC14Q15048 493 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 P2RX5Q93086 422 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 SH3GL2Q99962 352 aa17.19■□□□□ 0.34
SYNRG-223ENST00000616179 BMP2KQ9NSY1 1161 aaPredicted RBP17.19■□□□□ 0.34
SYNRG-223ENST00000616179 RAD51CO43502 376 aa17.18■□□□□ 0.34
SYNRG-223ENST00000616179 MCAMP43121 646 aa17.18■□□□□ 0.34
SYNRG-223ENST00000616179 INF2Q27J81 1249 aa17.18■□□□□ 0.34
SYNRG-223ENST00000616179 DZIP3Q86Y13 1208 aaKnown RBP17.18■□□□□ 0.34
SYNRG-223ENST00000616179 NLRP3Q96P20 1036 aa17.18■□□□□ 0.34
SYNRG-223ENST00000616179 PLTPP55058 493 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms