RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 PRDM1O75626 825 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ADCY5O95622 1261 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 STK3Q13188 491 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 DBN1Q16643 649 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 CERKLQ49MI3 558 aaPredicted RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 HSP90B2PQ58FF3 399 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 FAM47AQ5JRC9 791 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 CEP95Q96GE4 821 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 AGAP3Q96P47 875 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 ADARB2Q9NS39 739 aaKnown RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 A0A1B0GUA9 196 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 UNCXA6NJT0 531 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 AKR1B1P15121 316 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 DAGLBQ8NCG7 672 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 SLC44A5Q8NCS7 719 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
VPS11-206ENST00000614944 C16orf45Q96MC5 204 aaPredicted RBP9.88□□□□□ -0.83
VPS11-206ENST00000614944 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 GUCY1A2P33402 732 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 NOL9Q5SY16 702 aaKnown RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 USP50Q70EL3 339 aaPredicted RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 MICU3Q86XE3 530 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 FAM107BQ9H098 131 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 RIOX1Q9H6W3 641 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 KIF9Q9HAQ2 790 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 NCOA5Q9HCD5 579 aaKnown RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 TMOD4Q9NZQ9 345 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 ZNF215Q9UL58 517 aaPredicted RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 PARP14Q460N5 1801 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 RTN2O75298 545 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 ERLIN2O94905 339 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 PKP1Q13835 747 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 INF2Q27J81 1249 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 REXO1L1PQ8IX06 675 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 CSRNP1Q96S65 589 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 ZKSCAN3Q9BRR0 538 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 FOXP1Q9H334 677 aaPredicted RBP9.87□□□□□ -0.83
VPS11-206ENST00000614944 TMEM165Q9HC07 324 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS11-206ENST00000614944 USP25Q9UHP3 1055 aa9.87□□□□□ -0.83
VPS11-206ENST00000614944 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 PYGBP11216 843 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 H2AFXP16104 143 aaPredicted RBP9.86□□□□□ -0.83
VPS11-206ENST00000614944 XBP1P17861 261 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 IFT88Q13099 833 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 PFKFB3Q16875 520 aaPredicted RBP9.86□□□□□ -0.83
VPS11-206ENST00000614944 BTNL9Q6UXG8 535 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 C8orf76Q96K31 380 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 UTP6Q9NYH9 597 aaKnown RBP9.86□□□□□ -0.83
VPS11-206ENST00000614944 ESYT2A0FGR8 921 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 PHF20L1A8MW92 1017 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 RAB27AP51159 221 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 PKN1Q16512 942 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 ABCB5Q2M3G0 1257 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 DCAF15Q66K64 600 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 KCNV1Q6PIU1 500 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 SH2D4AQ9H788 454 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.86□□□□□ -0.83
VPS11-206ENST00000614944 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 CLIP2Q9UDT6 1046 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 SHTN1A0MZ66 631 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 PDHBP11177 359 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 OAS2P29728 719 aaKnown RBP9.86□□□□□ -0.83
VPS11-206ENST00000614944 ZBTB10Q96DT7 871 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 UBA5Q9GZZ9 404 aa9.86□□□□□ -0.83
VPS11-206ENST00000614944 RBBP6Q7Z6E9 1792 aaKnown RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 OTOFQ9HC10 1997 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 SOCS7O14512 581 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 NMT2O60551 498 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 CTNND1O60716 968 aaKnown RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 RPS6KA5O75582 802 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 CAP2P40123 477 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 CDC37L1Q7L3B6 337 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 TBC1D5Q92609 795 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 DDX11Q96FC9 970 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 PHF20Q9BVI0 1012 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 CABP5Q9NP86 173 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 ODF2LQ9ULJ1 636 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 MMP1P03956 469 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 PARP1P09874 1014 aaKnown RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 MRPL12P52815 198 aaKnown RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 SPATA21Q7Z572 469 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 SIAH1Q8IUQ4 282 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 SRBD1Q8N5C6 995 aaKnown RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 SPC24Q8NBT2 197 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 SCAND2PQ9GZW5 306 aaPredicted RBP9.85□□□□□ -0.83
VPS11-206ENST00000614944 HACL1Q9UJ83 578 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 CFAP45Q9UL16 551 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 TMX2Q9Y320 296 aa9.85□□□□□ -0.83
VPS11-206ENST00000614944 H3BQV1 296 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 KIF23Q02241 960 aaPredicted RBP9.84□□□□□ -0.83
VPS11-206ENST00000614944 ZNF543Q08ER8 600 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 IFFO2Q5TF58 517 aa9.84□□□□□ -0.83
VPS11-206ENST00000614944 C9orf131Q5VYM1 1079 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms