RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 NOA1Q8NC60 698 aaKnown RBP24.53■■□□□ 1.52
POLR2J3-220ENST00000613744 ADD3Q9UEY8 706 aaKnown RBP24.53■■□□□ 1.52
POLR2J3-220ENST00000613744 CYP2D6P10635 497 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 PPFIA1Q13136 1202 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 TRIM14Q14142 442 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 SART3Q15020 963 aaKnown RBP24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 CLIC6Q96NY7 704 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 SAMSN1Q9NSI8 373 aaKnown RBP24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 ATP8A2Q9NTI2 1148 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 MINDY4BA8MYZ0 360 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 USP17L12C9JPN9 530 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 USP17L21D6R901 530 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 ARHGAP25P42331 645 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 GPHNQ9NQX3 736 aaPredicted RBP24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 DONSONQ9NYP3 566 aa24.52■■□□□ 1.52
POLR2J3-220ENST00000613744 SCN4AP35499 1836 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 VEGFAP15692 232 aaPredicted RBP24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 MAP2K2P36507 400 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 CKAP4Q07065 602 aaKnown RBP24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 ALX1Q15699 326 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 DLK2Q6UY11 383 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 TRAPPC11Q7Z392 1133 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 RUBCNQ92622 972 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 SECISBP2LQ93073 1101 aaKnown RBP24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 IDI2Q9BXS1 227 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 GJB4Q9NTQ9 266 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 CEP83Q9Y592 693 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 FAM169AQ9Y6X4 670 aa24.51■■□□□ 1.51
POLR2J3-220ENST00000613744 CTDSPL2Q05D32 466 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 TRDNQ13061 729 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 TRIM29Q14134 588 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CYP26C1Q6V0L0 522 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 USP50Q70EL3 339 aaPredicted RBP24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 RALYLQ86SE5 291 aaKnown RBP24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 SPATS2Q86XZ4 545 aaKnown RBP24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 ZSCAN29Q8IWY8 852 aaPredicted RBP24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CNPY4Q8N129 248 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 GPATCH11Q8N954 259 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CRACR2AQ9BSW2 395 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 TMEM39BQ9GZU3 492 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 SLURP2P0DP57 97 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 HNRNPH1P31943 449 aaKnown RBP24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CDKAL1Q5VV42 579 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 PRAMEF18Q5VWM3 479 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CDAN1Q8IWY9 1227 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 MED15Q96RN5 788 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 CLEC11AQ9Y240 323 aa24.5■■□□□ 1.51
POLR2J3-220ENST00000613744 TEX33O43247 280 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 IRAK1P51617 712 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 ANTXR2P58335 489 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 HSP90AA4PQ58FG1 418 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 NBPF3Q9H094 633 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 CNTNAP1P78357 1384 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 DDTLA6NHG4 134 aaPredicted RBP24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 FOXN1O15353 648 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 PTPREP23469 700 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 E2F4Q16254 413 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 TBC1D10CQ8IV04 446 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 TRMT44Q8IYL2 757 aaKnown RBP24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 STAG1Q8WVM7 1258 aa24.49■■□□□ 1.51
POLR2J3-220ENST00000613744 POLR2AP24928 1970 aaKnown RBP24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 ANKRD65E5RJM6 399 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 SETQ01105 290 aaPredicted RBP24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 RASA3Q14644 834 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 SH3BP5LQ7L8J4 393 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 KAT2BQ92831 832 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 INCENPQ9NQS7 918 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 STK36Q9NRP7 1315 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 FOCADQ5VW36 1801 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 NAV1Q8NEY1 1877 aa24.48■■□□□ 1.51
POLR2J3-220ENST00000613744 A0A0U1RQJ8 604 aa24.47■■□□□ 1.51
POLR2J3-220ENST00000613744 ATRIPQ8WXE1 791 aa24.47■■□□□ 1.51
POLR2J3-220ENST00000613744 MNAT1P51948 309 aa24.47■■□□□ 1.51
POLR2J3-220ENST00000613744 ZNF662Q6ZS27 426 aa24.47■■□□□ 1.51
POLR2J3-220ENST00000613744 SERTAD1Q9UHV2 236 aa24.47■■□□□ 1.51
POLR2J3-220ENST00000613744 MYH1P12882 1939 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 GOLGA6CA6NDK9 693 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 GYPCP04921 128 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PRR29P0C7W0 189 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 GOLGA6DP0CG33 693 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 CASP14P31944 242 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 CCT5P48643 541 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 AKAP17AQ02040 695 aaKnown RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PPARAQ07869 468 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PNMA8AQ86V59 439 aaPredicted RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 DCPSQ96C86 337 aaKnown RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 DEFB129Q9H1M3 183 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PLEKHA4Q9H4M7 779 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 GOLGA6AQ9NYA3 693 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 SYNRGQ9UMZ2 1314 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 GOLGA8KD6RF30 607 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 EIF3HO15372 352 aaKnown RBP eCLIP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 INPP5BP32019 993 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 METAP2P50579 478 aaKnown RBP eCLIP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PAPD7Q5XG87 772 aaKnown RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 B4GALNT4Q76KP1 1039 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 PRPF38AQ8NAV1 312 aaKnown RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 ACRBPQ8NEB7 543 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 DYNLL2Q96FJ2 89 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 HAUS4Q9H6D7 363 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms