RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CDC37Q16543 378 aaPredicted RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 MIGA2Q7L4E1 593 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 ENGASEQ8NFI3 743 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TUBB2BQ9BVA1 445 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TAOK3Q9H2K8 898 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 ZBED4O75132 1171 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 CCNE1P24864 410 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TBC1D16Q8TBP0 767 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 BPIFA3Q9BQP9 254 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 HAUS4Q9H6D7 363 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 MRPL11Q9Y3B7 192 aaKnown RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 PIK3C2AO00443 1686 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 PLEKHG2Q9H7P9 1386 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L15C9J2P7 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L13C9JLJ4 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L11C9JVI0 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L18D6R9N7 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L22D6RA61 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L17D6RBQ6 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L19D6RCP7 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L20D6RJB6 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 ENC1O14682 589 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 C21orf2O43822 256 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 SMTNP53814 917 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L24Q0WX57 530 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 BIRC3Q13489 604 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 PTPROQ16827 1216 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 ARHGAP44Q17R89 818 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 USP17L6PQ6QN14 398 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 MIER3Q7Z3K6 550 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 NEDD1Q8NHV4 660 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 CALCOCO1Q9P1Z2 691 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 GH2P01242 217 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 AKR1B1P15121 316 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 CAPN2P17655 700 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 HOXA13P31271 388 aaPredicted RBP14.54□□□□□ -0.08
TCF3-220ENST00000611869 C8orf74Q6P047 294 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 TXNRD3Q86VQ6 643 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 BARHL2Q9NY43 387 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 IMPG2Q9BZV3 1241 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 STK24Q9Y6E0 443 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 BCL9O00512 1426 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
TCF3-220ENST00000611869 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
TCF3-220ENST00000611869 ATP2C1P98194 919 aaPredicted RBP14.54□□□□□ -0.08
TCF3-220ENST00000611869 ADGRA1Q86SQ6 560 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 HINFPQ9BQA5 517 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 PHF20Q9BVI0 1012 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
TCF3-220ENST00000611869 USP17L10C9JJH3 530 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 hCG_1984214I3L0E3 225 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 TEX33O43247 280 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 SEPT2Q15019 361 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 TMED8Q6PL24 325 aaPredicted RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 ZNF713Q8N859 430 aaPredicted RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 SMCR8Q8TEV9 937 aaPredicted RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 AGXT2Q9BYV1 514 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 OSBPL5Q9H0X9 879 aaPredicted RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 CCPG1Q9ULG6 757 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 BAZ2BQ9UIF8 2168 aaKnown RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 BUB1O43683 1085 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 FLOT1O75955 427 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 RXRBP28702 533 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 PRCPP42785 496 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 TNNC1P63316 161 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 RABGAP1Q9Y3P9 1069 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 NRXN3Q9Y4C0 1643 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 GNA14O95837 355 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 LRCH2Q5VUJ6 765 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 GPR161Q8N6U8 529 aaKnown RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 MPHOSPH6Q99547 160 aaKnown RBP14.53□□□□□ -0.08
TCF3-220ENST00000611869 PLVAPQ9BX97 442 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 CNTNAP4Q9C0A0 1308 aa14.53□□□□□ -0.08
TCF3-220ENST00000611869 SORBS3O60504 671 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 MYL1P05976 194 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 COL4A3BPQ9Y5P4 624 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 KRT5P13647 590 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 DESP17661 470 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 NR2F2P24468 414 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 PRPHP41219 470 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 NT5C2P49902 561 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 TROAPQ12815 778 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 TNFAIP1Q13829 316 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 NAA30Q147X3 362 aaPredicted RBP14.52□□□□□ -0.08
TCF3-220ENST00000611869 MCTP2Q6DN12 878 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 FNBP1Q96RU3 617 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 ANO3Q9BYT9 981 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 DAGLAQ9Y4D2 1042 aa14.52□□□□□ -0.08
TCF3-220ENST00000611869 CEP104O60308 925 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms