RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SYNRGQ9UMZ2 1314 aa8.35□□□□□ -1.07
CBWD1-219ENST00000611457 PRPF3O43395 683 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 KIF5BP33176 963 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 SLC4A3P48751 1232 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 UBIAD1Q9Y5Z9 338 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 REC8O95072 547 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 FOSP01100 380 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 PTH1RQ03431 593 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 DHX32Q7L7V1 743 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 DHX37Q8IY37 1157 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 PNMA1Q8ND90 353 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 PPTC7Q8NI37 304 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 NAP1L4Q99733 375 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 RNF26Q9BY78 433 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 RBM8AQ9Y5S9 174 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 CYP2D7A0A087X1C5 515 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 FARP2O94887 1054 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 NTRK3Q16288 839 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 TRIM71Q2Q1W2 868 aaKnown RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 SLC39A5Q6ZMH5 540 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 USP26Q9BXU7 913 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 RIC8AQ9NPQ8 531 aa8.34□□□□□ -1.07
CBWD1-219ENST00000611457 FAM217BQ9NTX9 383 aaPredicted RBP8.34□□□□□ -1.07
CBWD1-219ENST00000611457 SPATA31C2B4DYI2 1134 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 CASC1Q6TDU7 716 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 C22orf23Q9BZE7 217 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-219ENST00000611457 CLIP2Q9UDT6 1046 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 ZEB2O60315 1214 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 FLOT1O75955 427 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 BAIAP3O94812 1187 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
CBWD1-219ENST00000611457 CHGBP05060 677 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 PARP1P09874 1014 aaKnown RBP8.33□□□□□ -1.08
CBWD1-219ENST00000611457 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
CBWD1-219ENST00000611457 LRRC41Q15345 812 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 AMNQ9BXJ7 453 aa8.33□□□□□ -1.08
CBWD1-219ENST00000611457 TSPY2A6NKD2 308 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 INPPL1O15357 1258 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 EIF3JO75822 258 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PRKAR2AP13861 404 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 ACVR2BQ13705 512 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 KCTD2Q14681 263 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PHOSPHO2Q8TCD6 241 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 CDHR1Q96JP9 859 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 FEZ1Q99689 392 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 RRAGDQ9NQL2 400 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PPP1R11O60927 126 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 EFCAB14O75071 495 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 IFNAR1P17181 557 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PSMA5P28066 241 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 CLCN1P35523 988 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 SLC1A4P43007 532 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 SLC26A2P50443 739 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 RAB3GAP1Q15042 981 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 POTEDQ86YR6 584 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 ADGRF4Q8IZF3 695 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 LINC01465Q8N7H1 131 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 SYTL5Q8TDW5 730 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 LLPHQ9BRT6 129 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 COL4A2P08572 1712 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 SNRNP48Q6IEG0 339 aaKnown RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 ARMCX2Q7L311 632 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 SP7Q8TDD2 431 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 HERVK_113Q902F9 699 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 KAT14Q9H8E8 782 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 LMCD1Q9NZU5 365 aa8.32□□□□□ -1.08
CBWD1-219ENST00000611457 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.32□□□□□ -1.08
CBWD1-219ENST00000611457 F2P00734 622 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 SCP2P22307 547 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 SREBF1P36956 1147 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 SLFNL1Q499Z3 407 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 Q4G0T1 1027 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 TSC2P49815 1807 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 SMIM22K7EJ46 135 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 TBX3O15119 743 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 CYTH3O43739 400 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 CPT1AP50416 773 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 ARHGAP1Q07960 439 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 PFKFB3Q16875 520 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-219ENST00000611457 CAGE1Q8TC20 777 aa8.31□□□□□ -1.08
CBWD1-219ENST00000611457 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms