RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 USP17L1Q7RTZ2 530 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 PACS2Q86VP3 889 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 ZMYND12Q9H0C1 365 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 FLT1P17948 1338 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 ZSCAN29Q8IWY8 852 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-219ENST00000608720 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 ERGIC2Q96RQ1 377 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
CTCFL-219ENST00000608720 BAG3O95817 575 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 ASIC1P78348 528 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 GSTO1P78417 241 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 TXNRD1Q16881 649 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 FKBP15Q5T1M5 1219 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 LRRC15Q8TF66 581 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 PCMTD1Q96MG8 357 aaPredicted RBP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 TMEM47Q9BQJ4 181 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 NOC4LQ9BVI4 516 aaKnown RBP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 DEF6Q9H4E7 631 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 AARSP49588 968 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 STK4Q13043 487 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 NONOQ15233 471 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 CNNM4Q6P4Q7 775 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 EFCAB13Q8IY85 973 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
CTCFL-219ENST00000608720 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
CTCFL-219ENST00000608720 LAMB1P07942 1786 aa16.33■□□□□ 0.21
CTCFL-219ENST00000608720 SPATA31A6Q5VVP1 1343 aa16.33■□□□□ 0.21
CTCFL-219ENST00000608720 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.21
CTCFL-219ENST00000608720 KLRF2D3W0D1 207 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.2
CTCFL-219ENST00000608720 SRGAP2O75044 1071 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 GNA11P29992 359 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 PSEN1P49768 467 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 PPP4CP60510 307 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 KIF5AQ12840 1032 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
CTCFL-219ENST00000608720 IQCEQ6IPM2 695 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 NBPF5PQ86XG9 351 aaPredicted RBP16.33■□□□□ 0.2
CTCFL-219ENST00000608720 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 LACRTQ9GZZ8 138 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 TFR2Q9UP52 801 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 JAG2Q9Y219 1238 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 VAV2P52735 878 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 NAPAP54920 295 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 SPA17Q15506 151 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 LETM2Q2VYF4 491 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 MIIPQ5JXC2 388 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 TXNRD3Q86VQ6 643 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
CTCFL-219ENST00000608720 AFF2P51816 1311 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 MYH8P13535 1937 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 RCCD1A6NED2 376 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 KCNQ2O43526 872 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 KLK7P49862 253 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 NEK8Q86SG6 692 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 SECISBP2LQ93073 1101 aaKnown RBP16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CALML4Q96GE6 196 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CAPZA3Q96KX2 299 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CEP89Q96ST8 783 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
CTCFL-219ENST00000608720 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 USO1O60763 962 aaKnown RBP16.31■□□□□ 0.2
CTCFL-219ENST00000608720 LDHCP07864 332 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
CTCFL-219ENST00000608720 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
CTCFL-219ENST00000608720 MTMR7Q9Y216 660 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 FCER1AP12319 257 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 IDEP14735 1019 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 RASA1P20936 1047 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 SMARCA1P28370 1054 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 SOGA3Q5TF21 947 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
CTCFL-219ENST00000608720 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
CTCFL-219ENST00000608720 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
CTCFL-219ENST00000608720 GOLGA8HP0CJ92 632 aa16.3■□□□□ 0.2
CTCFL-219ENST00000608720 TECP42680 631 aa16.3■□□□□ 0.2
CTCFL-219ENST00000608720 GSCP56915 257 aaPredicted RBP16.3■□□□□ 0.2
CTCFL-219ENST00000608720 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
CTCFL-219ENST00000608720 CCDC70Q6NSX1 233 aa16.3■□□□□ 0.2
CTCFL-219ENST00000608720 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
CTCFL-219ENST00000608720 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms