RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 RAD50Q92878 1312 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 BAZ2AQ9UIF9 1905 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 hCG_1642624A0A1W2PR95 340 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 ERICH2A1L162 156 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 KLRF2D3W0D1 207 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 CTAGE5O15320 804 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 PPP1R11O60927 126 aaPredicted RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 ARIH2O95376 493 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 CFBP00751 764 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 ACRP10323 421 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 RAG1P15918 1043 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 EIF2AK2P19525 551 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 GJA9P57773 515 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 FAAP100Q0VG06 881 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 WTAPQ15007 396 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 SNX17Q15036 470 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 SEC23AQ15436 765 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 SHHQ15465 462 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 ASPRV1Q53RT3 343 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 FAM47CQ5HY64 1035 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 GPATCH4Q5T3I0 446 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.61□□□□□ -1.35
HCG18-243ENST00000602498 FBXO11Q86XK2 927 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 TICAM2Q86XR7 235 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 CCDC82Q8N4S0 544 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 OR6J1Q8NGC5 347 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 NCOA7Q8NI08 942 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 SYTL5Q8TDW5 730 aaPredicted RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 GLT1D1Q96MS3 346 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 WDR11Q9BZH6 1224 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 LSG1Q9H089 658 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 TRPV6Q9H1D0 765 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 MAD2L2Q9UI95 211 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 GNEQ9Y223 722 aaKnown RBP6.61□□□□□ -1.35
HCG18-243ENST00000602498 CDK5RAP2Q96SN8 1893 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 FOCADQ5VW36 1801 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 TRIOBPQ9H2D6 2365 aa6.61□□□□□ -1.35
HCG18-243ENST00000602498 UMODL1Q5DID0 1318 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 DCDC2CA8MYV0 355 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 SLC27A2O14975 620 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 PRC1O43663 620 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 MYCLP12524 364 aaPredicted RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 CPA1P15085 419 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 CYP2C18P33260 490 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 BMP8BP34820 402 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 CCL23P55773 120 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 GRM4Q14833 912 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 LY6KQ17RY6 165 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 CCDC178Q5BJE1 867 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 CREB3L3Q68CJ9 461 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 FCHSD1Q86WN1 690 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 MB21D2Q8IYB1 491 aaPredicted RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 DEFB123Q8N688 67 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 PCSK9Q8NBP7 692 aaKnown RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 ANKS1AQ92625 1134 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 MAP4K1Q92918 833 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 CCDC136Q96JN2 1154 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 UPF3AQ9H1J1 476 aaKnown RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 ADD3Q9UEY8 706 aaKnown RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 NAP1L2Q9ULW6 460 aaPredicted RBP6.6□□□□□ -1.35
HCG18-243ENST00000602498 PCDHA1Q9Y5I3 950 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 PLXNB2O15031 1838 aa6.6□□□□□ -1.35
HCG18-243ENST00000602498 DOCK3Q8IZD9 2030 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 GRIN2DO15399 1336 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 ABCB11O95342 1321 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 WDR19Q8NEZ3 1342 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 A0A0U1RQG5 324 aaPredicted RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 PALM3A6NDB9 673 aaPredicted RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 MOXD2PA6NHM9 499 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 ARVCFO00192 962 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 OPLAHO14841 1288 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 CYTH3O43739 400 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 PPFIA3O75145 1194 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 PLEKHA8P1O95397 391 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 TXNP10599 105 aaKnown RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 CYP2C9P11712 490 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 CSF2RAP15509 400 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 CST5P28325 142 aaPredicted RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 ITGA7Q13683 1181 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 SART3Q15020 963 aaKnown RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 PPP2R5BQ15173 497 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 ARHGEF16Q5VV41 709 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 IQSEC1Q6DN90 963 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 FAM109BQ6ICB4 259 aaPredicted RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 CASC1Q6TDU7 716 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 CENPQQ7L2Z9 268 aaPredicted RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 CATIPQ7Z7H3 387 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 IL31RAQ8NI17 732 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 AFG1LQ8WV93 481 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 GPKOWQ92917 476 aaPredicted RBP eCLIP6.59□□□□□ -1.35
HCG18-243ENST00000602498 SCLYQ96I15 445 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 RNPC3Q96LT9 517 aaKnown RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 RMDN3Q96TC7 470 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.35
HCG18-243ENST00000602498 AMNQ9BXJ7 453 aa6.59□□□□□ -1.35
HCG18-243ENST00000602498 LY9Q9HBG7 655 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms