RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 CNTNAP1P78357 1384 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
LINC00343-209ENST00000601607 MON2Q7Z3U7 1717 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 FBXO27Q8NI29 283 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 MIPEPQ99797 713 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 KRTAP9-9Q9BYP9 154 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 KRTAP9-4Q9BYQ2 154 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 KIF13BQ9NQT8 1826 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 TJP2Q9UDY2 1190 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 CORINQ9Y5Q5 1042 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 CCDC85CA6NKD9 419 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 EOMESO95936 686 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 CST3P01034 146 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-209ENST00000601607 ZNF76P36508 570 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 EIF4A3P38919 411 aaKnown RBP9.68□□□□□ -0.86
LINC00343-209ENST00000601607 FBXL19Q6PCT2 694 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 FAM214BQ7L5A3 538 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 HDGFL2Q7Z4V5 671 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-209ENST00000601607 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 NETO1Q8TDF5 533 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 DPH2Q9BQC3 489 aaPredicted RBP9.68□□□□□ -0.86
LINC00343-209ENST00000601607 GTF2IRD1Q9UHL9 959 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 ASAP1Q9ULH1 1129 aa9.68□□□□□ -0.86
LINC00343-209ENST00000601607 KDM6AO15550 1401 aaPredicted RBP9.67□□□□□ -0.86
LINC00343-209ENST00000601607 TLR3O15455 904 aaKnown RBP9.67□□□□□ -0.86
LINC00343-209ENST00000601607 ITIH2P19823 946 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 RGS19P49795 217 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 OXCT1P55809 520 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 MFSD2AQ8NA29 543 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 RGS22Q8NE09 1264 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
LINC00343-209ENST00000601607 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 C4AP0C0L4 1744 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 HSPA8P11142 646 aaKnown RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 PLCG1P19174 1290 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 MRPL41Q8IXM3 137 aaKnown RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 ZNF296Q8WUU4 475 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 MKNK2Q9HBH9 465 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 ADAMTS1Q9UHI8 967 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 ADAM30Q9UKF2 790 aa9.66□□□□□ -0.86
LINC00343-209ENST00000601607 SUPT16HQ9Y5B9 1047 aaKnown RBP9.66□□□□□ -0.86
LINC00343-209ENST00000601607 CEACAM5P06731 702 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 RFC4P35249 363 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 DDR1Q08345 913 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 MPP2Q14168 576 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.86
LINC00343-209ENST00000601607 SLC6A19Q695T7 634 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 LETMD1Q6P1Q0 360 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 MCATQ8IVS2 390 aaKnown RBP9.65□□□□□ -0.86
LINC00343-209ENST00000601607 COG3Q96JB2 828 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 KCNQ5Q9NR82 932 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
LINC00343-209ENST00000601607 TPX2Q9ULW0 747 aaKnown RBP9.65□□□□□ -0.86
LINC00343-209ENST00000601607 POLR3KQ9Y2Y1 108 aaPredicted RBP9.65□□□□□ -0.86
LINC00343-209ENST00000601607 RTL1A6NKG5 1358 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 BRCA1P38398 1863 aaKnown RBP9.64□□□□□ -0.87
LINC00343-209ENST00000601607 IGF2BP3O00425 579 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00343-209ENST00000601607 FANCCQ00597 558 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 IFI16Q16666 785 aaKnown RBP9.64□□□□□ -0.87
LINC00343-209ENST00000601607 NFXL1Q6ZNB6 911 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 FLCNQ8NFG4 579 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 RIN3Q8TB24 985 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 BCL7CQ8WUZ0 217 aaPredicted RBP9.64□□□□□ -0.87
LINC00343-209ENST00000601607 TERF2IPQ9NYB0 399 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 ADGRE2Q9UHX3 823 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 PLAGL2Q9UPG8 496 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
LINC00343-209ENST00000601607 PDE4DIPQ5VU43 2346 aa9.64□□□□□ -0.87
LINC00343-209ENST00000601607 KDRP35968 1356 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 MAP2P11137 1827 aaKnown RBP9.63□□□□□ -0.87
LINC00343-209ENST00000601607 ARFGEF1Q9Y6D6 1849 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 GREM1O60565 184 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 RECKO95980 971 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 CWF19L2Q2TBE0 894 aaKnown RBP9.63□□□□□ -0.87
LINC00343-209ENST00000601607 SRP68Q9UHB9 627 aaKnown RBP9.63□□□□□ -0.87
LINC00343-209ENST00000601607 MAPK8IP1Q9UQF2 711 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 SLC5A6Q9Y289 635 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
LINC00343-209ENST00000601607 ROCK2O75116 1388 aaKnown RBP9.63□□□□□ -0.87
LINC00343-209ENST00000601607 PASKQ96RG2 1323 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 CNTNAP4Q9C0A0 1308 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 UPK3BL1B0FP48 263 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 UPK3BL2E5RIL1 263 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 HTR3BO95264 441 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 VAMP1P23763 118 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 BNIP3Q12983 259 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 TMEM201Q5SNT2 666 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 TP53INP2Q8IXH6 220 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 FAM13CQ8NE31 585 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 MRRFQ96E11 262 aaKnown RBP9.62□□□□□ -0.87
LINC00343-209ENST00000601607 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
LINC00343-209ENST00000601607 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms