RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 DNERQ8NFT8 737 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 CCDC12Q8WUD4 166 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 ABHD16BQ9H3Z7 469 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 FLRT1Q9NZU1 646 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 NID2Q14112 1375 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 ST18O60284 1047 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 TFRCP02786 760 aaKnown RBP15□□□□□ -0.01
SRRM1-223ENST00000600523 TAL1P17542 331 aaPredicted RBP15□□□□□ -0.01
SRRM1-223ENST00000600523 ADD1P35611 737 aaKnown RBP15□□□□□ -0.01
SRRM1-223ENST00000600523 SOX10P56693 466 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 CNTN2Q02246 1040 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 PDE4DQ08499 809 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 NSUN6Q8TEA1 469 aaKnown RBP15□□□□□ -0.01
SRRM1-223ENST00000600523 DEFB118Q96PH6 123 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 GLT8D2Q9H1C3 349 aa15□□□□□ -0.01
SRRM1-223ENST00000600523 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
SRRM1-223ENST00000600523 CNTNAP5Q8WYK1 1306 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 CDC27P30260 824 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 AK2P54819 239 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 NAPAP54920 295 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 SSRP1Q08945 709 aaKnown RBP14.99□□□□□ -0.01
SRRM1-223ENST00000600523 TRIM32Q13049 653 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 STK3Q13188 491 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 RABEP1Q15276 862 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 SLC30A10Q6XR72 485 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 ARMCX2Q7L311 632 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 SMARCC2Q8TAQ2 1214 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 PAK6Q9NQU5 681 aaPredicted RBP14.99□□□□□ -0.01
SRRM1-223ENST00000600523 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.99□□□□□ -0.01
SRRM1-223ENST00000600523 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
SRRM1-223ENST00000600523 MYH6P13533 1939 aa14.99□□□□□ -0.01
SRRM1-223ENST00000600523 SEPT4O43236 478 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 PPP1R11O60927 126 aaPredicted RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 SGPL1O95470 568 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 CYBAP13498 195 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 IFNAR1P17181 557 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 GJA8P48165 433 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 ALDH5A1P51649 535 aaPredicted RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 ARHGEF16Q5VV41 709 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 U2AF1L4Q8WU68 220 aaKnown RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 RMDN3Q96TC7 470 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 PSTPIP2Q9H939 334 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 EHMT1Q9H9B1 1298 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 DDX20Q9UHI6 824 aaKnown RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 FAM184BQ9ULE4 1060 aa14.98□□□□□ -0.01
SRRM1-223ENST00000600523 ZNFX1Q9P2E3 1918 aaKnown RBP14.98□□□□□ -0.01
SRRM1-223ENST00000600523 hCG_1642624A0A1W2PR95 340 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 RARBP10826 455 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SCG2P13521 617 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 AKR1A1P14550 325 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 CCND3P30281 292 aaPredicted RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 HSD17B4P51659 736 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 ACVR2BQ13705 512 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SLC35G1Q2M3R5 365 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SYTL5Q8TDW5 730 aaPredicted RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 LARP6Q9BRS8 491 aaKnown RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SLC26A6Q9BXS9 759 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 BACH2Q9BYV9 841 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SPC25Q9HBM1 224 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 NCOA5Q9HCD5 579 aaKnown RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 VTA1Q9NP79 307 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 FAM217BQ9NTX9 383 aaPredicted RBP14.97□□□□□ -0.01
SRRM1-223ENST00000600523 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
SRRM1-223ENST00000600523 SPDYE3A6NKU9 549 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 PFKFB2O60825 505 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 XBP1P17861 261 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 GHRHRQ02643 423 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 STXBP2Q15833 593 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
SRRM1-223ENST00000600523 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 FCHSD1Q86WN1 690 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 ZSCAN31Q96LW9 406 aaPredicted RBP14.96□□□□□ -0.01
SRRM1-223ENST00000600523 BARHL2Q9NY43 387 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 TPCN1Q9ULQ1 816 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
SRRM1-223ENST00000600523 POTEFA5A3E0 1075 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 PIK3CDO00329 1044 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 DEXIO95424 95 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 SNAI1O95863 264 aaPredicted RBP14.95□□□□□ -0.02
SRRM1-223ENST00000600523 IGHA2P01877 340 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 GNA11P29992 359 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 HOXA13P31271 388 aaPredicted RBP14.95□□□□□ -0.02
SRRM1-223ENST00000600523 ADCY7P51828 1080 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 FUT2Q10981 343 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 WWC2Q6AWC2 1192 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 MCTP2Q6DN12 878 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 BICD2Q8TD16 824 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 WASF1Q92558 559 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.021e-32■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms