RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
VRK3-219ENST00000600137 TRPV1Q8NER1 839 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 SYTL5Q8TDW5 730 aaPredicted RBP15.89■□□□□ 0.13
VRK3-219ENST00000600137 RNF26Q9BY78 433 aaPredicted RBP15.89■□□□□ 0.13
VRK3-219ENST00000600137 SLKQ9H2G2 1235 aaPredicted RBP15.89■□□□□ 0.13
VRK3-219ENST00000600137 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 DDX49Q9Y6V7 483 aaKnown RBP15.89■□□□□ 0.13
VRK3-219ENST00000600137 PFASO15067 1338 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 BRCA2P51587 3418 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 MEIS2O14770 477 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 SNAI1O95863 264 aaPredicted RBP15.88■□□□□ 0.13
VRK3-219ENST00000600137 HMGCRP04035 888 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 INHAP05111 366 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 CYP2C19P33261 490 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 CACNB2Q08289 660 aaPredicted RBP15.88■□□□□ 0.13
VRK3-219ENST00000600137 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
VRK3-219ENST00000600137 RNF207Q6ZRF8 634 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 TRMT44Q8IYL2 757 aaKnown RBP15.88■□□□□ 0.13
VRK3-219ENST00000600137 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
VRK3-219ENST00000600137 GTF3C6Q969F1 213 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
VRK3-219ENST00000600137 RBBP6Q7Z6E9 1792 aaKnown RBP15.87■□□□□ 0.13
VRK3-219ENST00000600137 KIAA0100Q14667 2235 aaKnown RBP15.87■□□□□ 0.13
VRK3-219ENST00000600137 STXBP3O00186 592 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 ADAMTS3O15072 1205 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 FDPSP14324 419 aaKnown RBP15.87■□□□□ 0.13
VRK3-219ENST00000600137 TRAF1Q13077 416 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 TAAR1Q96RJ0 339 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 KATNBL1Q9H079 304 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 BARHL2Q9NY43 387 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 SLC5A4Q9NY91 659 aa15.87■□□□□ 0.13
VRK3-219ENST00000600137 SEC63Q9UGP8 760 aaKnown RBP15.87■□□□□ 0.13
VRK3-219ENST00000600137 PTPDC1A2A3K4 754 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 CFBP00751 764 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 SCG2P13521 617 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 CALML3P27482 149 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 PRAMEF19Q5SWL8 479 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 MCF2L2Q86YR7 1114 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
VRK3-219ENST00000600137 NSUN7Q8NE18 718 aaKnown RBP15.86■□□□□ 0.13
VRK3-219ENST00000600137 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
VRK3-219ENST00000600137 MAP3K20Q9NYL2 800 aaKnown RBP15.86■□□□□ 0.13
VRK3-219ENST00000600137 PIK3CDO00329 1044 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
VRK3-219ENST00000600137 CYBAP13498 195 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
VRK3-219ENST00000600137 EDNRBP24530 442 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
VRK3-219ENST00000600137 ALDH5A1P51649 535 aaPredicted RBP15.85■□□□□ 0.13
VRK3-219ENST00000600137 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 ZSCAN31Q96LW9 406 aaPredicted RBP15.85■□□□□ 0.13
VRK3-219ENST00000600137 AIFM3Q96NN9 605 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
VRK3-219ENST00000600137 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 CPLX1O14810 134 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 CCL5P13501 91 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 CCND3P30281 292 aaPredicted RBP15.84■□□□□ 0.13
VRK3-219ENST00000600137 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
VRK3-219ENST00000600137 MFSD14CQ5VZR4 134 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 ARMCX2Q7L311 632 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 HEATR3Q7Z4Q2 680 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 ZNF713Q8N859 430 aaPredicted RBP15.84■□□□□ 0.13
VRK3-219ENST00000600137 DNERQ8NFT8 737 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 PAK6Q9NQU5 681 aaPredicted RBP15.84■□□□□ 0.13
VRK3-219ENST00000600137 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
VRK3-219ENST00000600137 RPTORQ8N122 1335 aa15.84■□□□□ 0.13
VRK3-219ENST00000600137 LRRC37A2A6NM11 1700 aa15.83■□□□□ 0.13
VRK3-219ENST00000600137 LOC102724159A0A0B4J2E5 919 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 GCOM1H8Y6P7 765 aaPredicted RBP15.83■□□□□ 0.12
VRK3-219ENST00000600137 JAK2O60674 1132 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 POLR2MP0CAP2 368 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 UBXN2AP68543 259 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 PWP2Q15269 919 aaKnown RBP15.83■□□□□ 0.12
VRK3-219ENST00000600137 NPY5RQ15761 445 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 LHX8Q68G74 356 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 SMARCC2Q8TAQ2 1214 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 TMX3Q96JJ7 454 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 ZMYND12Q9H0C1 365 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 RIC8AQ9NPQ8 531 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.83■□□□□ 0.12
VRK3-219ENST00000600137 BIN2Q9UBW5 565 aaPredicted RBP15.83■□□□□ 0.12
VRK3-219ENST00000600137 STK36Q9NRP7 1315 aa15.83■□□□□ 0.12
VRK3-219ENST00000600137 ESYT2A0FGR8 921 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 SMCO2A6NFE2 343 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 ASB14A6NK59 587 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 ST18O60284 1047 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 DEXIO95424 95 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 MYCP01106 439 aaPredicted RBP15.82■□□□□ 0.12
VRK3-219ENST00000600137 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
VRK3-219ENST00000600137 NAPAP54920 295 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 TAPT1Q6NXT6 567 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 PPP1R18Q6NYC8 613 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 CCDC83Q8IWF9 413 aa15.82■□□□□ 0.12
VRK3-219ENST00000600137 RMDN3Q96TC7 470 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms