RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 MYO9BQ13459 2157 aa16.15■□□□□ 0.18
IRF3-225ENST00000600022 BAATQ14032 418 aaPredicted RBP16.15■□□□□ 0.18
IRF3-225ENST00000600022 SCLYQ96I15 445 aa16.15■□□□□ 0.18
IRF3-225ENST00000600022 NKX2-4Q9H2Z4 354 aa16.15■□□□□ 0.18
IRF3-225ENST00000600022 HIPK3Q9H422 1215 aa16.15■□□□□ 0.18
IRF3-225ENST00000600022 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
IRF3-225ENST00000600022 ASB14A6NK59 587 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 NFIBO00712 420 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 ERC2O15083 957 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 TLR3O15455 904 aaKnown RBP16.14■□□□□ 0.17
IRF3-225ENST00000600022 FGBP02675 491 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
IRF3-225ENST00000600022 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 C8orf34Q49A92 452 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 KIAA1211Q6ZU35 1233 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 HERVK_113Q902F9 699 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 FAM227BQ96M60 508 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 NOC4LQ9BVI4 516 aaKnown RBP16.14■□□□□ 0.17
IRF3-225ENST00000600022 AP5M1Q9H0R1 490 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
IRF3-225ENST00000600022 FRMPD2Q68DX3 1309 aaPredicted RBP16.14■□□□□ 0.17
IRF3-225ENST00000600022 LCTP09848 1927 aa16.13■□□□□ 0.17
IRF3-225ENST00000600022 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
IRF3-225ENST00000600022 MORC4Q8TE76 937 aa16.13■□□□□ 0.17
IRF3-225ENST00000600022 TMEM47Q9BQJ4 181 aa16.13■□□□□ 0.17
IRF3-225ENST00000600022 TRMT13Q9NUP7 481 aaKnown RBP16.13■□□□□ 0.17
IRF3-225ENST00000600022 ANAPC4Q9UJX5 808 aa16.13■□□□□ 0.17
IRF3-225ENST00000600022 FGAP02671 866 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 ICAM1P05362 532 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 FGRP09769 529 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 CYP2C9P11712 490 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
IRF3-225ENST00000600022 RRP12Q5JTH9 1297 aaKnown RBP16.12■□□□□ 0.17
IRF3-225ENST00000600022 PSRC1Q6PGN9 363 aaPredicted RBP16.12■□□□□ 0.17
IRF3-225ENST00000600022 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 RANBP17Q9H2T7 1088 aaKnown RBP16.12■□□□□ 0.17
IRF3-225ENST00000600022 TRANK1O15050 2925 aa16.12■□□□□ 0.17
IRF3-225ENST00000600022 LRRC37A2A6NM11 1700 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 IGFBP4P22692 258 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
IRF3-225ENST00000600022 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 SLC30A10Q6XR72 485 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 COPS5Q92905 334 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
IRF3-225ENST00000600022 RFXAPO00287 272 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 ORC4O43929 436 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 CABYRO75952 493 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 SDSP20132 328 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 ALDH5A1P51649 535 aaPredicted RBP16.1■□□□□ 0.17
IRF3-225ENST00000600022 HAND2P61296 217 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 TTLL4Q14679 1199 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 DUSP28Q4G0W2 176 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
IRF3-225ENST00000600022 GAS2L1Q99501 681 aaPredicted RBP16.1■□□□□ 0.17
IRF3-225ENST00000600022 WDR11Q9BZH6 1224 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
IRF3-225ENST00000600022 VTA1Q9NP79 307 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 BDP1A6H8Y1 2624 aa16.1■□□□□ 0.17
IRF3-225ENST00000600022 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 MYL3P08590 195 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 CALML3P27482 149 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 ALX1Q15699 326 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 DCAF4Q8WV16 495 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 TBC1D5Q92609 795 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 MSRAQ9UJ68 235 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 Q9Y3F1 56 aa16.09■□□□□ 0.17
IRF3-225ENST00000600022 GBF1Q92538 1859 aa16.08■□□□□ 0.17
IRF3-225ENST00000600022 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.16
IRF3-225ENST00000600022 CDC45O75419 566 aa16.08■□□□□ 0.16
IRF3-225ENST00000600022 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.16
IRF3-225ENST00000600022 PURAQ00577 322 aaKnown RBP16.08■□□□□ 0.16
IRF3-225ENST00000600022 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
IRF3-225ENST00000600022 DEFB128Q7Z7B8 93 aa16.08■□□□□ 0.16
IRF3-225ENST00000600022 SYMPKQ92797 1274 aaKnown RBP16.08■□□□□ 0.16
IRF3-225ENST00000600022 EVI5LQ96CN4 794 aa16.08■□□□□ 0.16
IRF3-225ENST00000600022 SLC28A3Q9HAS3 691 aa16.08■□□□□ 0.16
IRF3-225ENST00000600022 ZEB2O60315 1214 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 ARHGEF15O94989 841 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 ARIH2O95376 493 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 GOLGA8HP0CJ92 632 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 HSPD1P10809 573 aaKnown RBP16.07■□□□□ 0.16
IRF3-225ENST00000600022 PDHBP11177 359 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
IRF3-225ENST00000600022 RAB30Q15771 203 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 NBPF20Q3BBV1 942 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 TBC1D10CQ8IV04 446 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 ASB2Q96Q27 587 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 ZKSCAN3Q9BRR0 538 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 CERS4Q9HA82 394 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 SLC4A7Q9Y6M7 1214 aa16.07■□□□□ 0.16
IRF3-225ENST00000600022 TNKSO95271 1327 aa16.06■□□□□ 0.16
IRF3-225ENST00000600022 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms