RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TIFAQ96CG3 184 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 PBX4Q9BYU1 374 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 HIPK3Q9H422 1215 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 ZNF576Q9H609 170 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 VTA1Q9NP79 307 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 CXXC1Q9P0U4 656 aaPredicted RBP18.94■□□□□ 0.62
LIM2-202ENST00000596399 NEDD4P46934 1319 aa18.94■□□□□ 0.62
LIM2-202ENST00000596399 B4GALT4O60513 344 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 IGHDP01880 384 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 GOLGA8HP0CJ92 632 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 CALML3P27482 149 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 ZNF543Q08ER8 600 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 MFSD6Q6ZSS7 791 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 USP38Q8NB14 1042 aa18.93■□□□□ 0.62
LIM2-202ENST00000596399 TMEM265A0A087WTH1 108 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 CABYRO75952 493 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 SDSP20132 328 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 DUSP28Q4G0W2 176 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
LIM2-202ENST00000596399 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
LIM2-202ENST00000596399 WDR11Q9BZH6 1224 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 IL23AQ9NPF7 189 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 ZMYM6O95789 1325 aa18.92■□□□□ 0.62
LIM2-202ENST00000596399 SNHG28P0DPA3 235 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 PLEKHM2Q8IWE5 1019 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 SMC5Q8IY18 1101 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 UBA5Q9GZZ9 404 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 WNT8AQ9H1J5 351 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 Q9Y3F1 56 aa18.91■□□□□ 0.62
LIM2-202ENST00000596399 ZEB2O60315 1214 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 RPS6P62753 249 aaKnown RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 USH1GQ495M9 461 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 PSRC1Q6PGN9 363 aaPredicted RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 RNF207Q6ZRF8 634 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 OTOP2Q7RTS6 562 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 COPS5Q92905 334 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 VWCEQ96DN2 955 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 SCLYQ96I15 445 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 ALDH8A1Q9H2A2 487 aaPredicted RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 PRDM6Q9NQX0 595 aa18.9■□□□□ 0.62
LIM2-202ENST00000596399 TRMT13Q9NUP7 481 aaKnown RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 ADD3Q9UEY8 706 aaKnown RBP18.9■□□□□ 0.62
LIM2-202ENST00000596399 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
LIM2-202ENST00000596399 FGBP02675 491 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 MYL3P08590 195 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 CYP2C9P11712 490 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 CHD1LQ86WJ1 897 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 HERVK_113Q902F9 699 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 TBC1D5Q92609 795 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 TTC14Q96N46 770 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 PRDM12Q9H4Q4 367 aa18.89■□□□□ 0.61
LIM2-202ENST00000596399 RBAK-RBAKDNI3L0D1 243 aa18.88■□□□□ 0.61
LIM2-202ENST00000596399 PURAQ00577 322 aaKnown RBP18.88■□□□□ 0.61
LIM2-202ENST00000596399 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
LIM2-202ENST00000596399 PPM1EQ8WY54 764 aa18.88■□□□□ 0.61
LIM2-202ENST00000596399 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
LIM2-202ENST00000596399 YBX2Q9Y2T7 364 aaKnown RBP18.88■□□□□ 0.61
LIM2-202ENST00000596399 CHD7Q9P2D1 2997 aa18.88■□□□□ 0.61
LIM2-202ENST00000596399 ZNF213O14771 459 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 KDM4AO75164 1064 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 RABGGTBP53611 331 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 NUCB1Q02818 461 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 PDE4DQ08499 809 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 TICAM2Q86XR7 235 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 ESR2Q92731 530 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 NKX2-4Q9H2Z4 354 aa18.87■□□□□ 0.61
LIM2-202ENST00000596399 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 B4E1Z4 1266 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 ARIH2O95376 493 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 MYOGP15173 224 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 EDNRBP24530 442 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 RNF41Q9H4P4 317 aaPredicted RBP18.86■□□□□ 0.61
LIM2-202ENST00000596399 GBF1Q92538 1859 aa18.86■□□□□ 0.61
LIM2-202ENST00000596399 TNKSO95271 1327 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 PCP11498 1178 aaKnown RBP18.85■□□□□ 0.61
LIM2-202ENST00000596399 MFAP1P55081 439 aaKnown RBP18.85■□□□□ 0.61
LIM2-202ENST00000596399 ADGRE1Q14246 886 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
LIM2-202ENST00000596399 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 DGKHQ86XP1 1220 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 PNMA1Q8ND90 353 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 IL25Q9H293 177 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 COL20A1Q9P218 1284 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 REV3LO60673 3130 aa18.85■□□□□ 0.61
LIM2-202ENST00000596399 LOC102724159A0A0B4J2E5 919 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 TXNP10599 105 aaKnown RBP18.84■□□□□ 0.61
LIM2-202ENST00000596399 CPT1AP50416 773 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 CHMP4BP1P59074 171 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 PPP2R5BQ15173 497 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 PWP2Q15269 919 aaKnown RBP18.84■□□□□ 0.61
LIM2-202ENST00000596399 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 GPATCH4Q5T3I0 446 aaKnown RBP18.84■□□□□ 0.61
LIM2-202ENST00000596399 DEFB128Q7Z7B8 93 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
LIM2-202ENST00000596399 TAAR1Q96RJ0 339 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms